Streptomyces fradiae: CP974_23010
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Entry
CP974_23010 CDS
T07648
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sfb
Streptomyces fradiae
Brite
KEGG Orthology (KO) [BR:
sfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfb03009
]
CP974_23010 (rimO)
Enzymes [BR:
sfb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP974_23010 (rimO)
Ribosome biogenesis [BR:
sfb03009
]
Prokaryotic type
ribosomal protein modification factors
CP974_23010 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QEV14382
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Position
5141309..5142808
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AA seq
499 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWALVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISERLRTIL
GGGSVEAHAPRDRRKLLPLSPVERQDAAAAVALPGHGAPQGPGAPQAPADLPEGIAPASG
PRAPLRRRLDSSPVASVKLASGCDRRCSFCAIPSFRGSFVSRRPADVLGETRWLAEQGVK
EIMLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTE
KVAPYFDLSFQHSAPAVLRAMRRFGDTDRFLELLDTIRGKAPQAGVRSNFIVGFPGETEE
DFAELERFVLHARLDAVGVFGYSDEDGTEAATYDGKLDQDTVDQRLAHLSRLAEELTAQR
AEERLGETLEVLVESVEGDDLEDEEYAAAGRAAHQAPETDGQVLFTTGAGLSVGRMVKAK
VVGTEGVDLVAEVLEEAGR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggcgctcgtcgaggacgccgcc
gacgccgatgtcgccgtcgtcaacacctgcggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctcgaagcgaacgacctgaaggaccacggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcggtacggcaaggagctcgccgacgccctgcccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgagcggctgcgcaccatcctc
ggcggcggcagcgtggaggcccacgccccgcgcgaccggcgcaagctgctgccgctcagc
ccggtcgagcgccaggacgccgccgcggccgtcgccctgcccggccacggcgcgccgcag
ggccccggggccccgcaggcccccgccgatctgcccgagggcatcgcgcccgcatccggc
ccgcgcgccccgctgcgccgccgcctcgactccagcccggtcgcctccgtgaagctggcc
tccggttgcgaccggcgctgctccttctgcgcgatcccgtccttccgcggctccttcgtc
tcccgccgccccgccgacgtgctgggcgagacgcgctggctggccgagcagggcgtcaag
gagatcatgctggtctccgagaacaacacctcgtacggcaaggacctcggcgacatccgc
ctgctggagacgctgctgcccgagctggccgccgtcgacggcatcgagcgcgtccgcgtc
agctacctgcagcccgccgagatgcggcccggcctgatcgacgtgctgacctccacggag
aaggtcgcgccctacttcgacctgtcgttccagcactccgcgcccgccgtgctgcgcgcc
atgcgccgcttcggcgacacggaccgcttcctggagctgctggacaccatccgcggcaag
gccccgcaggcgggtgtgcgctccaacttcatcgtgggcttccccggcgagaccgaggag
gacttcgccgagctggagcggttcgtcctgcacgcccgcctcgacgccgtcggcgtcttc
ggctactccgacgaggacggcaccgaggccgccacctacgacggcaagctcgaccaggac
accgtcgaccagcgcctcgcccacctgtcccggctcgccgaggagctcaccgcccagcgt
gcggaggagcggctgggagagaccctggaagtactggtcgagtcggtcgagggcgacgac
ctcgaggacgaggagtacgccgccgcgggccgcgcggcccaccaggcgcccgagacggac
gggcaggtgctcttcacgacgggcgccgggctctccgtcggccgtatggtcaaggcgaag
gtggtgggcacggaaggcgtcgatctggtggccgaggttctcgaggaggcgggcagatga
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