KEGG   Spirochaeta africana: Spiaf_0404
Entry
Spiaf_0404        CDS       T01811                                 
Name
(GenBank) CRISPR-associated helicase Cas3, subtype I-F/YPEST
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sfc  Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:sfc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfc02048]
    Spiaf_0404
Enzymes [BR:sfc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Spiaf_0404
Prokaryotic defense system [BR:sfc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Spiaf_0404
SSDB
Motif
Pfam: Cas3_I-F_Cas2 DEAD Cas3_HD ResIII
Other DBs
NCBI-ProteinID: AFG36509
UniProt: H9UG66
LinkDB
Position
483209..486595
AA seq 1128 aa
MIVTFISQCEKKALSRTRRVLDTYASRIGSRTWQTVITMDGLAAIKKHLRKTATKNTAVA
CHWMRGKTRTELLWVVGNRQQFDSEGVVPVHSTQRDVFSGLTESDWDLLPQIKIVAAISA
LFHDWGKASELFQSKLRPSDKRKEKVLGDPVRHEWVSCFLFAEFVRSCGSTDREWLDALS
DGRLDEKKIIQSVQASEKTLIEKVRHVPADLPPLASVVLYILLTHHRLPVYRGSGRSQWK
GVKRGSFKELLQIISYEWSYANYLETEDQRCRLPLCFSFPHGICTDSPAWMKQIKKWSQR
ALERYTSFSEIINSPGFRSLIHFSRLAVMLGDHIYSSQQADPSWKTDIPLYANTEKDNSL
KQKLDEHLVGVMKQALKTAHLLPRLESSMDEARDVQSLKAAARPGTKYYWQDKAVEKILA
WRTEQAELLKKQDQSFGFFTVNMASTGCGKTTANAKVMQALSRDCDSLRYILALGLRTLT
LQTGDEYKERLGLDETELAVLIGSKAIATLHREWHNAQQNEDSEDTVEMSSESQETLLDD
HIDFACDIPEGDLRTLLQTEKDRQMLFAPVLSCTIDHMMAATETTRGGRWILPFMRLMTS
DLVIDEIDDFSGTDMIAVGRLVFLAGMLGRKVMISSATITPDIAEGYFHTYHQGWTTYTA
SRNANETVGCCWIDEFRTVTSTVQDSDSISASRNFANHHNHFIEKRVRSLRSQRNQKGAR
RVGQLIQCKDLLEIGSEVEREEALFERSAQTILSLHQDNCHTDPVTGKTVSFGCVRMANI
DPCVSMTKYLLGFQWPEDVCVYAMAYHSRQVLLLRNEQERHLDSVLKCKTEEPRRAAFSN
LVIRKQIEKNAAANIVFVLVATPVEEVGRDHDFDWAIIEPSSYRSIIQLAGRVRRHRSTV
VQKPNIAILEFNRKGLLSEGDQPVFTRPGFETDSMLLNSHSMASLVNVRDMEKGIDAVPR
ISRNQELKPKDSLVDLEHNSIHCSLTHYKQVPGPETMHGWHHNSFWWLTGQAQQYNYAPF
RAGESQIEICDIYTEDGNYFGEWEQRNKIWLDRELVYRIDRERDSDMGYERLWLHRDYRA
LLERREDQYGESPGKASGVFGRLTFPKRFEGSKLLYSEQFGLVENRRE
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgatcgttacgtttatctcccaatgcgaaaagaaagcactaagtcgtacacgacgagtg
cttgatacatatgcttccaggataggcagcagaacctggcagacggtaatcaccatggat
ggcttggctgcgatcaaaaaacacctgcgcaagacagcaacaaaaaacaccgcagttgct
tgtcactggatgcgaggtaagacacggacggaattgctctgggtggttggtaacaggcag
cagttcgattctgaaggggttgtacctgtacattcgactcagagggatgtgttttccgga
ttaaccgaaagtgattgggatctcctgccgcagataaagattgttgctgccatctctgct
ttgtttcatgactggggcaaggcttctgagctattccagtcaaagctgcgtccgagtgat
aaaagaaaggaaaaagttcttggcgatccggttcggcatgaatgggtgtcgtgtttcctg
tttgcagaatttgtcagaagctgtggctcaacggaccgagagtggcttgatgcattgtct
gacggtagactggatgagaaaaaaatcatccagtctgtgcaagcatctgaaaaaacactg
attgaaaaagtgaggcatgttccggcagatctgccgcctctggccagcgtcgttctgtat
atcctgctgacacatcatcgcctccctgtgtaccgtggatctggtcgatcacaatggaaa
ggggtaaagcgaggctcattcaaggagttgttgcaaataatcagctatgaatggagttat
gccaattatctggagactgaagatcagcgatgcagattgcccctttgtttttcatttcca
catggtatatgtacggattcgccggcatggatgaagcagattaaaaagtggtcgcaaaga
gcactggaaaggtatacatccttttcagaaatcattaactcgccaggatttcgcagcctc
attcatttttcgagattagctgttatgctgggtgatcatatctattcatcgcaacaggca
gatccctcgtggaaaaccgacatcccactgtacgcaaatactgagaaagataacagttta
aagcagaaacttgatgagcatttggttggtgttatgaagcaggcgctcaaaacagcacac
ttgcttccaagactagagtcatcgatggatgaagcccgtgatgtccagagcctgaaggct
gcggcaagacctggaacaaaatattactggcaagataaagcggtagagaagattctggca
tggagaaccgaacaggcagagttactcaagaagcaggatcagtcgttcgggttcttcacg
gttaatatggcaagtacggggtgcggcaaaacaactgccaatgcgaaagttatgcaagct
ttgtcccgggattgtgacagcttgcgatatattctggcgcttggcctgcgaacattaacg
ttgcaaaccggtgatgaatacaaggaacgtttgggactggatgaaaccgagcttgcagta
ttgatcgggtctaaagccattgcaacactgcaccgtgaatggcacaacgcacaacaaaac
gaagatagtgaagacacggttgagatgagttcagagtcccaggaaacactactggatgac
catattgactttgcctgtgacatacctgagggtgatcttcgtacactcctccagacagag
aaggatcgacagatgctgtttgctcctgtgttgtcttgtacgatcgatcacatgatggct
gctaccgaaaccaccaggggtggcagatggattttgccgtttatgcgtttgatgaccagc
gatctggtgattgacgagatcgatgatttttccggcacagatatgattgcagttgggcgc
ttggtatttcttgctggtatgttgggccgaaaggtaatgatctcctcggctacaattact
cccgatatcgccgagggctattttcatacttatcaccaaggatggactacctacacagca
tcgagaaatgcaaatgaaactgtaggttgttgctggatcgacgaattcagaactgttaca
tcgactgtacaggattctgattcaatcagcgcatcgcgcaactttgccaatcatcataat
cattttattgagaagcgggttcgcagcttacgctctcaaaggaaccagaaaggtgctcgc
agggttggtcagttaattcaatgtaaagatcttctcgaaattggatctgaagtagagcgg
gaagaagctctttttgagcgctctgcgcagaccatattgagtcttcatcaggacaactgc
cataccgatcccgtgaccgggaaaactgtttcctttggctgtgtgcgaatggcaaacatt
gatccctgtgtttctatgacgaaatatctgcttggctttcaatggccggaagatgtttgt
gtgtatgctatggcatatcattcccgtcaggttctactgttgcggaatgaacaggagcga
cacctcgacagtgtactgaaatgtaaaaccgaggagccccgacgtgcagcattcagtaac
ctggtaattcgaaaacaaatagaaaaaaatgctgctgcgaatattgtattcgtgcttgta
gcaacaccggtagaagaggttggtagagatcatgattttgattgggcgattatcgagcct
tcttcgtatcggtcaattattcagctggcagggcgagtaaggcgtcatcgcagcactgtt
gtacagaagccgaacattgctattctggaattcaaccgcaaaggtttgctttctgaagga
gaccagcctgtatttacccgccctggatttgaaaccgacagtatgctcttgaactctcat
tcaatggccagtttggtcaacgtacgagatatggaaaaggggatcgatgcggttcccagg
atcagccggaatcaggagctgaaaccgaaggattcattggtcgatctggagcacaacagt
attcattgcagtttgacacactacaagcaagtaccagggcccgagactatgcatggatgg
caccataatagcttctggtggttgaccggtcaggcacaacaatacaattacgcgccgttt
agagcgggagaatcgcagattgagatttgcgacatatacactgaagacgggaattatttc
ggtgaatgggaacaacgaaacaaaatttggctagatcgtgaattagtgtacaggatagat
agggagcgagatagcgatatgggatatgagcgattatggttgcatcgagactatcgtgca
ttactggaaaggagggaagatcagtatggggagtcaccaggaaaagcatccggagttttc
ggaaggttgacgtttcctaaaagatttgaaggcagcaaactattgtattccgagcagttt
ggtttggttgagaacaggcgagaatga

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