Spirochaeta africana: Spiaf_0500
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Entry
Spiaf_0500 CDS
T01811
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sfc
Spirochaeta africana
Pathway
sfc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spiaf_0500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfc02000
]
Spiaf_0500
Transporters [BR:
sfc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Spiaf_0500
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFG36603
UniProt:
H9UGG0
LinkDB
All DBs
Position
complement(600236..601765)
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AA seq
509 aa
AA seq
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MRKGILIALLGALVAVLIIGCGADQTGDAKPQNTDVLVVVSPADARSLDPQATNDQASAR
VMNQIYETLMYQTEDLEVELGLVSDYTVESETEYLFTLREGVMFHNGEELTADDVKFTFE
RMREVNSPAAFLVAALDRVEVIDDYTFRMILDFPFGPFITHLGHPATAILNRTAVEAGGE
DYGRNPVGTGPFKFVQWRSGDSITLERFEDYRLGPAASREVRFRFISEDTNRAIALETGE
ADIIYDVGPNDFDNLVEMDSIDAIQSEGLTTFYMGFNVEKEPFDDVRVRRAINLAVDVET
ATDVAFRGYATAARGPLAPNVLFANNDLPGYGYDPDQARELLAEAGYADGFRTSIWTNDN
PVRIRYAEIFQEQLAQVGIDLNIEIMEFAPYLDRTAQGEHDMFMLGWVAVTGDADYGLYS
LFHSSEFGDAGNRTFWANDEVDRLLDLGKTDPDPEVRRDAYYRAQEIIFEEAPWVFLAFR
DELNATRNWVEGFVPHTAGHHKLYQVFNN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagggattctcatcgcgcttctcggtgcgcttgtcgcagttctgattatcggt
tgtggagccgatcagacaggtgatgcaaaaccgcagaacactgatgtgctggtggttgta
agcccggccgatgctcgctcgctcgacccgcaggcaaccaacgaccaggcatccgcacgc
gtaatgaaccagatctacgaaacactgatgtatcagaccgaggatctggaggttgagctg
ggactggtaagcgactacaccgtagaaagcgaaaccgagtatctgttcaccctgcgtgag
ggcgtcatgttccacaacggtgaggaactgaccgcagatgatgtcaagttcacctttgag
cgcatgcgcgaggtaaacagcccggctgccttcctggttgcagccctggatcgggttgag
gttatcgacgactacaccttccgcatgatcctggactttccgttcggtccgttcatcacc
catctgggccacccggctaccgcaatcctgaaccgtacggcggtagaggccggcggcgag
gactacggccgcaatccggttggtaccggtccgttcaagttcgtacagtggcgttcaggt
gactccattaccctggagcgcttcgaagactaccgcctgggaccagcagcttcccgtgag
gttcgcttccgctttatctcggaggacaccaaccgcgcgatagccctggaaaccggtgaa
gccgacattatctacgatgtagggccgaacgactttgacaacctggtagaaatggacagc
attgatgcgatccagtccgagggtctgaccaccttctacatgggtttcaacgttgagaag
gagccctttgacgatgtacgcgttcgccgcgccatcaacctggccgtggatgtagagacc
gctaccgacgtagctttccgcggatatgctactgctgcccgcggtccgctggcaccgaat
gtgctgttcgccaacaacgacctgcccggctacggctacgatcctgatcaggctcgtgaa
ctgcttgcagaagcaggctatgccgacgggttccgcaccagcatctggaccaacgacaac
ccggttcgcatccgctatgccgagatcttccaggagcagctggctcaggtcgggatcgat
ctgaacatcgagatcatggagttcgctccctacctggaccgcaccgcccagggcgagcat
gacatgttcatgctgggttgggttgccgtaaccggtgatgctgactacggtctgtactcg
ctgtttcacagcagtgagtttggcgatgccggtaaccgcaccttctgggcaaacgacgag
gtagaccgcctgctggatctgggtaaaaccgatccggatccggaagtccgccgcgatgcc
tactaccgtgcacaggagatcatcttcgaggaagctccgtgggtattcctggcctttcgt
gacgagctgaacgcgacccgcaactgggtcgagggctttgtcccgcataccgccgggcac
cacaagctgtatcaggtgttcaacaactag
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