Spirochaeta africana: Spiaf_0577
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Entry
Spiaf_0577 CDS
T01811
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sfc
Spirochaeta africana
Pathway
sfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Spiaf_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfc03021
]
Spiaf_0577
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_0577
Enzymes [BR:
sfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Spiaf_0577
Transcription machinery [BR:
sfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Spiaf_0577
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Spiaf_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_A_bac
HHH_5
WSN
Motif
Other DBs
NCBI-ProteinID:
AFG36678
UniProt:
H9UGN5
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All DBs
Position
670599..671666
Genome browser
AA seq
355 aa
AA seq
DB search
MARKNLLQGFKRPKGITFEHSEVNPEYGKFVAYPFERGYGHTIGNTLRRVLLSSLQGYAI
SAIRVTSYATDGSAHVLSNEFEAIPEVQEDTADIIYNLRQVRFSLPEDMDSKTIMVNLKG
KGRITAADLEVDTDVKVANPELYLMTLMADANIDIEIQVDMGRGYVPSESNEEYIDVVGT
IPLDAVYTPIKRVKYEVENTRIGHRTDFDKLILEVWTDGTIKPDDAVAEAAKIAKDHLTI
FINFDEDQIVTDEQDDEESRLLESFLSTPVEELELSVRSSNCLKNADIRTIGDLTAKTED
DIAKTRNFGKKSLQEIKEKLAEWNLTLGMSDYSSIKGNLKYHQKAGTGKETQDEA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaagaatttgttgcagggtttcaagcgccccaaagggatcacatttgagcat
tcggaagtaaaccctgagtatggaaaattcgtcgcgtatccttttgagcgaggctatggg
cacactatcgggaataccctgcgtcgtgtcctgctgtcctctctccagggctatgcgatt
tccgctattcgagtaacctcttacgccaccgatggcagcgcacacgttctgtcgaacgag
ttcgaggccattccggaggtccaggaggataccgcagacatcatctacaatctgcgacag
gttcgattcagtctgcccgaagatatggattcaaaaaccattatggttaacctgaaggga
aagggccggattaccgcggccgatcttgaggttgataccgatgtcaaggtagccaatccg
gagttgtatcttatgaccctgatggcagatgcaaatattgatatcgaaatccaggtcgat
atggggcgtggctatgtaccgtcggagagtaacgaggagtacatagatgtggtgggtacg
ataccgcttgatgccgtatataccccgatcaagcgagtgaaatacgaggtagagaataca
cgtatcggacatcgtacagacttcgacaagctgatactggaggtatggaccgatggtacc
atcaagccggatgatgccgttgccgaagctgccaagatcgccaaggatcatctgacgata
ttcatcaattttgacgaggatcagatcgttaccgacgaacaggacgatgaagagtcacgc
ctgctggagagctttctcagcacaccggttgaagagctcgaactgtcagttcgctccagt
aactgtctgaagaatgcggacatccgcactatcggtgatcttacggcgaagaccgaggac
gatattgccaagactcgcaacttcgggaaaaaatcgcttcaggaaatcaaagaaaagctt
gctgaatggaaccttacattgggaatgtcggattacagctcgatcaagggcaatctgaag
taccaccagaaagcaggtacgggaaaggaaacgcaagatgaggcatag
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