Spirochaeta africana: Spiaf_0584
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Entry
Spiaf_0584 CDS
T01811
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
sfc
Spirochaeta africana
Pathway
sfc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spiaf_0584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_0584
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spiaf_0584
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Spiaf_0584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
Kinesin
UB2H
RdfA
Microtub_bd
MTC2_N
Motif
Other DBs
NCBI-ProteinID:
AFG36685
UniProt:
H9UGP2
LinkDB
All DBs
Position
679346..681331
Genome browser
AA seq
661 aa
AA seq
DB search
MPPFRVASAYEPAGDQGTAIESLVAGVQGGERFQVLRGVTGSGKTYTMAKVIEATQLPSL
IISHNKTLAAQLYREFKEFFPDNAVEYFVSYYDYYQPEAYVSSRDLYIEKDASINDEIDR
LRLAATTNLFERPDVIVVATVSCIYGLGSPQDYRTMRLRFDVGQELDLTAVRSRLVSLQY
ERNDAVLRRASFRIKGDTMEIYPAYMEHAYRIELEFDEIISLKEIHPLTGEVIEQRQTVF
VYPAKHFVMPESQMLPALDGIKQELAARYTELQEKGRLVEAQRLKSRTEYDIEMMEEMGY
CNGIENYSRHLSNRFQGERPAVLLDYFPDNYLTFIDESHVTVPQIGGMYAGDRSRKQSLV
EYGFRLPSALDNRPLFYEEFEQLMDRTVFVSATPGEKELQKVSTVVEQIIRPTGLVDPQV
QIRPTEGQIEDIYAEIQKRIGMNERTLITTLTKKMAEDLTEYLTNMGLKVQYLHSEVETV
ERVEILTALRTGTYDVLVGINLLREGLDLPEVSLIAILDADKIGFLRSATSLIQTIGRAA
RNVNGLVLMYADKMSDAMRTAIDETERRRSIQLEYNQAHGITPQTIRKSIQDILVRQTEQ
KRQDEKTNIEIISSGFNVMQARDRKKLIAELEKLMLEHAKNLEFEEAAVVRDEIDKIRSL
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccgccatttcgagtagcatcagcctatgaaccggccggggatcaaggcacggcgatt
gaatcgcttgtcgctggtgtgcagggtggtgaacgctttcaggtactgcgcggtgtaacc
ggcagcggcaaaacctacaccatggccaaggtgattgaggcaacccagctgccaagtctg
atcatctcgcataacaagaccctggctgcacagctgtaccgcgagttcaaggagtttttt
ccggacaacgcggtggagtactttgtcagttactacgactactaccagccggaggcgtat
gtatcctcgcgtgatctctatatcgagaaggacgcgtcgatcaatgacgagattgatcga
ctcagactggcggctacgaccaatctctttgaacgaccggatgtgatcgtggtagcaacg
gtttcctgtatctacggactggggagtccgcaggattaccgaaccatgcggctgcgcttt
gatgttggccaggaacttgatctaactgccgtgcgcagtcgactggtttcactgcagtat
gaacgtaacgatgccgtgctgcgccgtgccagttttcgtattaaaggggatacgatggag
atctatcccgcgtacatggagcatgcataccggatagagcttgagttcgatgaaattatc
tcgctcaaggagattcatcccctgacaggtgaggttatcgagcagcgccaaacggtgttt
gtatatcctgccaagcattttgtcatgccggagtcgcagatgctgccggctctcgacggc
ataaaacaggagctggcagcgcggtacacggagttgcaggagaagggcaggctggtagag
gcgcagagactcaagagtcgtaccgagtatgatatcgagatgatggaggagatggggtac
tgcaacgggatagagaactactcccgccatctgagtaatcgctttcagggcgagcgcccg
gctgttctgctggattactttccggataactatcttacctttattgatgagtcgcatgta
acagtccctcagatcgggggcatgtatgctggagaccgcagtcggaaacagtcgctggta
gagtacgggttccgccttccctctgcactggacaatcgccctctgttttatgaagagttt
gaacagctcatggatcgcaccgtgtttgtcagtgctacaccgggcgagaaagagctgcag
aaggtttccaccgtagtggagcagatcatccgcccgaccggactggtggatcctcaggta
cagatccgacctaccgaggggcagatcgaggatatctatgccgagatccagaagcgtatc
ggcatgaacgagcgtaccctgatcaccaccttgaccaaaaaaatggccgaggatcttacc
gaatacctgaccaacatgggcttgaaggtccagtacctgcactccgaagtcgagacggtt
gaacgggtagaaatcctgacggcgctgcggaccggtacctacgatgtgctggtaggaatc
aacctgttgcgtgaggggctggacctgccggaggtatccctgattgcgatcctcgatgcc
gacaagatcgggtttctgcgcagcgctaccagcctgattcagaccatcgggcgggcagcc
cgtaatgtgaacgggctggtgttgatgtacgccgacaagatgagcgacgccatgagaact
gccatagatgaaaccgagcggcgtcgcagcattcagctggagtataaccaggctcacggg
ataaccccgcagaccatcaggaaatcgatccaggatatactggttcgacagacagagcag
aagcgtcaggatgaaaagacgaacatagagattatttccagcgggtttaatgtgatgcag
gcacgtgatcggaaaaaactgattgccgagctggaaaaattgatgctggaacatgccaag
aacctcgagtttgaagaggctgctgttgtcagggatgaaattgataaaatccgctccctc
ggatag
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