Spirochaeta africana: Spiaf_0828
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Entry
Spiaf_0828 CDS
T01811
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfc
Spirochaeta africana
Pathway
sfc03420
Nucleotide excision repair
sfc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spiaf_0828
03430 Mismatch repair
Spiaf_0828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_0828
Enzymes [BR:
sfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spiaf_0828
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spiaf_0828
MMR (mismatch excision repair)
Other MMR factors
Spiaf_0828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
DEAD
Terminase_6N
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFG36921
UniProt:
H9UHC8
LinkDB
All DBs
Position
complement(953236..955230)
Genome browser
AA seq
664 aa
AA seq
DB search
MNLKAELNQKQYIAASTIDGPLLIIAGAGSGKTRVITFRIAHMLEMGIPQSQILALTFTN
KAAREMAERVRELTGKKLPQLTVSTFHAFGVKVLRDTISSIGYKDNFSIYDTVDQISLLK
ESAREIRFDMEDENPQNILGIFSRIKTKRGDWDEVTSYYQGLYASYQRHLKLYNAVDFDD
LIMLPIHILDTHPEILNRYTERYRYIMVDEFQDTSMGQYRFMKLLADGSRNICVVGDDDQ
SIYSWRGANYENIISFERDYPELKEVKLEQNYRSTETILEAANTLIANNTNRKGKQLWTG
TKSMNKIEIAYPANERDEAQFIAEQIKGIHMRDSIKFGEFGVLIRTNTLSRAIEELFLME
NIPYKMSGGTSFYQRKEIKDMICYMRILANPEDDVSLLRILNVPRRGIGARTLEQLRSLA
DMHDWSLHTAIQAAVYATDSPFSERAKTDLRSFLQLIEAFRPKILSPRKIASTLKELTDA
IDYWEYLLQEHPKDEKIPTWKWRNIEIFIQSIEDYEKNPDNMNPSLFNYLNRISLTTKDE
PDDDEGKVNLMTIHSAKGLEHEVVFLAGVESHIIPHARAIEDDPANIEEERRLFYVAITR
AKQRLIMTSCRSRKVLREEMECLPSPFLEELPQHLLQETEAAADVEAAEATDYFQLLRKK
LGGV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaaagctgaactcaaccagaaacaatatatcgcggccagcaccatcgatgga
ccgctgctgatcattgccggggccggctccggcaagacccgggtaataaccttccgtatt
gctcatatgctggagatgggcatcccccagagtcagattctggcactgacatttaccaac
aaggcggcccgggagatggccgagcgggtgcgcgaactcaccggcaagaagttgccgcag
ctgaccgtatccacctttcatgccttcggggtaaaggtgctgcgcgataccatcagctcg
attggctacaaggacaacttctccatctacgacaccgtagaccagatatcgctactgaag
gaatctgcccgcgagatacgctttgatatggaagacgaaaacccgcagaacatcctgggg
attttctcccgtatcaagacaaagcgtggtgattgggatgaggtcacctcctactatcag
ggtctgtatgccagctatcagcgacacctgaagctgtacaacgccgtagattttgacgac
ttgatcatgctgccaatccacatcctggatacccacccggagattcttaaccggtacacc
gagagataccgctatatcatggtggatgagttccaggatacctcgatggggcagtaccgc
tttatgaagctattggccgatggatcgcgcaatatctgtgtagtcggcgacgatgaccag
tcaatctacagctggcgcggtgccaactacgagaatatcatcagttttgaacgggattac
cccgagctcaaagaggtcaagctggagcagaactaccgcagcaccgaaaccattctggag
gctgccaacaccctgatcgccaacaacaccaaccgcaagggcaaacagctgtggaccggc
accaagagcatgaacaagatcgagattgcctacccggccaatgagcgcgacgaggcgcag
tttatcgctgaacagatcaagggaatccacatgcgcgacagcatcaagttcggggagttc
ggggtgctaattcgcaccaacaccctgtcccgcgccatcgaagaattattcctgatggag
aatattccctacaaaatgagcggaggaaccagcttctatcagcgcaaggagatcaaggac
atgatctgctacatgcgtatcctggcgaatccggaagacgatgtgagcctgctgcggatc
ctgaatgttccccgacgcgggatcggggcgcgcaccctggagcagctgcggtcactggct
gacatgcacgactggagtctgcacaccgcgatccaggcggcggtatacgccaccgattca
cccttcagcgaacgcgccaaaaccgatctgcgcagctttctgcagctgatcgaggcattt
cgtccgaaaatcctgtccccgcgcaagatcgcctctaccctgaaagagctcaccgatgct
atcgattactgggagtatctgctccaggaacatcccaaggatgaaaagatcccgacctgg
aaatggcggaacatcgagattttcatccagagcatcgaggattacgagaagaaccccgac
aacatgaatccaagcctgtttaactacctgaaccgcatcagccttaccaccaaggacgaa
ccggacgacgacgagggcaaggtgaacctgatgacgattcactcagccaagggactggag
cacgaggtggtattcctggccggggtggagtcgcacatcattccccatgcccgagctata
gaggatgatccggcaaacatcgaggaagagcggcgcctgttttatgtagcgattacccga
gccaaacagcgtctgattatgaccagctgtcgaagccgaaaggttctgcgtgaggagatg
gaatgccttccctcccccttcctggaagaactgcctcagcatctgctgcaggaaaccgag
gcagccgcagatgtcgaggccgccgaggctaccgactattttcagctgctgcgcaagaag
cttggcggggtatag
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