Spirochaeta africana: Spiaf_0903
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Entry
Spiaf_0903 CDS
T01811
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_0903
Enzymes [BR:
sfc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Spiaf_0903
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Spiaf_0903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFG36992
UniProt:
H9UHJ9
LinkDB
All DBs
Position
complement(1037498..1038982)
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AA seq
494 aa
AA seq
DB search
MNSAAIIYPHQLYDPASHPVLESGRPVYLVEEPLVLTYNPVHRQRLLLHRLSMQAYARQL
RKRDYTVHYLDLRRLDGTDAVWQQLAQDGIRTIHVADTTDDYLERALAKAETSHGIQRTW
YESPLFLLPKPEAVQRYLDAKRHMARFYQSLRVDREILTDRDRQPVGGQWSYDKDNRKKL
PENLELPTDIQPWVPQTSEEQQEIAQAQAWLGEIPGRHYGSSQIWCGWTTEHAGQDLHAF
LSARFADFGSYEDAISQTHTRVFHSTLSPYLNIGLLSPRQVLDAVLAHAGRNHIPINSLE
GFIRQLIGWREFMRAAYEQDGRSMRTRNFFGHTRALPAAVWSGKTGIHPLDTAIHRSLTW
GYSHHIERLMVTGNYLLLTGTHPDQVYEWFMGMFIDAYDWVMVPNVYGMSQFADGGLFAT
KPYISGSNYLHKMGDYPRGPWQDDWTALYWNFIHQHRALFAANHRMSMMPRMLDKMSPDT
REAHLQRAARILQT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgccgcgataatctaccctcatcagctctacgaccccgcatcccacccggtg
ctggaatcggggcggccggtatatctggtagaggaaccccttgttctgacttacaacccg
gtccaccgtcaacggctgctgctgcaccgcctgtcgatgcaggcctatgccaggcagctg
cggaagcgtgactacaccgtgcactatctggatctgcgccgcctcgacggcaccgacgca
gtctggcagcagctggcccaggacggcattcgcaccatccatgtcgccgacaccaccgat
gactaccttgagcgtgccctggctaaggccgaaacctcgcacggcatccagcgcacctgg
tacgaaagcccgctgtttctgctgccaaaacctgaggcggtccaacgctatctcgacgcc
aaacgacacatggcccggttctaccagagtctgcgtgtggaccgggagattctgaccgac
cgggaccggcagcccgttggcggccagtggagctacgacaaggacaaccggaaaaaactg
cccgaaaaccttgagctgccgaccgacatccagccctgggtcccgcagacctccgaggaa
cagcaggagatcgctcaggcccaggcctggctgggcgagatccccggacgccactacggc
agcagccaaatatggtgcggctggaccacggaacatgcagggcaggacctgcatgccttt
ttgtcggcgcgctttgctgatttcggcagctacgaggacgccatcagccagacccatacc
cgggtgttccactccactctctcgccctacctgaacatcgggctgctgtccccccgtcag
gtcctggatgcggtgctggctcacgccggaaggaaccacatcccgatcaactcactggaa
ggctttatccggcagctgattggctggcgcgagttcatgcgcgccgcttacgaacaggac
gggcgcagcatgcgcacccgcaacttctttggccatacccgtgccctgcccgccgcagtc
tggagcggaaaaaccggcattcacccgctggacaccgccattcaccgcagtctgacctgg
ggctactcacatcatattgagcgcctgatggtaaccggcaattacctcctgcttaccggc
acccaccctgaccaggtctatgagtggtttatggggatgttcatcgatgcctatgactgg
gtgatggttccgaacgtctacggcatgagccagttcgccgacggcggactgtttgccacc
aaaccctacatcagcgggagcaactacctgcacaagatgggcgactatccacgcggcccc
tggcaggacgactggaccgccctgtactggaactttatccaccagcaccgcgcgctgttc
gccgccaaccaccgcatgtcgatgatgccgcgcatgctggacaagatgtcccccgacacc
cgtgaggcacaccttcagcgtgccgcccggatcctgcagacataa
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