Spirochaeta africana: Spiaf_1079
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Entry
Spiaf_1079 CDS
T01811
Name
(GenBank) primosomal protein N''
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfc
Spirochaeta africana
Pathway
sfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spiaf_1079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_1079
Enzymes [BR:
sfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spiaf_1079
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spiaf_1079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
ATPase_2
ADDB_N
nSTAND_NTPase5
AAA_19
AAA_16
DUF3638
Zot
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AFG37166
UniProt:
H9UI23
LinkDB
All DBs
Position
1242726..1244684
Genome browser
AA seq
652 aa
AA seq
DB search
MAGFVEVAFSLPLERTFTYSCDTTPQPGCRVIAPFGGRSLHGVAVATHHDAPQGYQVKPL
ERVLDEEPLLTPQLLELGRWMAGMYFASWGECLGTMIPNAKEERRVPSLGGGDPEPNPVP
ITPSAAQASAIRCITEGSSGGTAGRYFLYGVTGSGKTEVFLQSAEHILAQGRGIIYLVPE
IALTHQVAEMLKSRFGDTAAILHSRMTPSQRLGEWRRIRRGEARMVIGARSAVFAPVQHL
GLIILDEEHEGAYKAGDRPRYHARQIAMKRCSSEQATLIMGSATPSVEAKHLMDTGGLQA
LHLPERISGGGMPALEIVDMRREKESLSQQLRTEIQETLQSGRQVILFLNRRGFSHFFHC
RSCGYEMHCPHCSVGLTLHKHRGRMVCHYCGYTTRPIDVCPACKSLDVGYSGFGTEHIED
EVRRHFPQASIDRLDTDSAGRKGVVERILGDFRSGKTDILLGTQMVAKGLNFPGLHLVGI
VLADTGLHMPDFRAAERTFTLITQVAGRAGRYHPDGRVLIQTYQPDNPVIRQAAAGDVEG
FYRTEIDVRRMTGFPPFSRMIRLVVRGKQEQSVRNAADELSARLHSGGRFPGECMGPSEC
PLGKIAGNYRMQILLRSRSGGDIHTRLSQVLPGFKLPRGLHLEIDVDPIQLL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggccggctttgtcgaggtcgccttctccctgccgctggaacgtacctttacctacagc
tgcgataccaccccgcaacccggctgccgggttattgcgccgttcggcggacgttcgctg
cacggggtggcggtagcgactcaccacgacgccccgcagggctatcaggtaaagcccctg
gaacgggttctggatgaagagccgctgctgaccccccagctgctggaactggggcgctgg
atggccgggatgtactttgcttcctggggcgagtgcctgggaaccatgatcccgaatgcc
aaggaagagcggcgggtgccgtcactgggcggcggggatcccgagccgaatccggtaccg
attaccccgtcggccgcacaggcctctgctatccgctgtattaccgagggcagttccggc
gggaccgccgggcgctacttcctgtacggagtaactggcagcggcaagaccgaggtgttc
ctgcagtcggccgagcacatcctggcgcagggcagagggatcatctatctggttcccgag
attgccctgacccatcaggtggctgagatgcttaaaagccggtttggcgatactgctgca
atcctccactcgcgtatgaccccgtcgcagcggctgggggagtggcggcgcattcgccgc
ggcgaggcccgcatggtgattggcgcccgcagtgcggtgtttgccccggtgcagcacctt
ggcctgatcatccttgacgaggagcacgaaggagcctacaaggccggcgatcgcccgcgc
tatcatgcccgccagattgccatgaaacgctgctccagtgaacaggcaaccctgatcatg
ggcagcgccaccccgtcggttgaggccaagcaccttatggataccggcgggctgcaggcc
ttgcatctgccggaacggatctccggcgggggcatgccggccctggaaatcgtggatatg
cggcgcgagaaggaatccctgtcgcagcagctgcgtaccgagatacaggaaaccctgcag
tcggggcgtcaggtgatactgttcctgaatcgccgcggtttttcccatttctttcattgc
cgcagctgcggctacgagatgcactgcccgcactgctcggtcgggctgaccctgcacaag
catcgtggccggatggtgtgccactactgcggttacaccacccgcccgatcgacgtctgc
cccgcgtgtaaatcactggatgtcggctactccgggtttggcaccgaacacatcgaggac
gaggtgcgaagacattttccccaggccagtattgatcgactggataccgacagtgccggt
cgcaagggggtggtggagcgcattctgggggattttcgcagcggcaagaccgatatcctg
ctgggtacccagatggtagccaaggggctgaactttcccggtctgcatctggtcgggatt
gtgctggcagataccgggctgcacatgcccgacttccgggctgccgagcgtacctttacc
ctgattacccaggttgccgggcgtgccgggcggtatcacccggacggccgggtgcttatc
cagacctaccagccggacaacccggtaatccggcaggctgctgccggggatgtggaaggt
ttttaccgtaccgagatcgatgtacgacggatgaccgggtttccgccattctcccggatg
attcgcctggtggtacgtggcaaacaggaacagagcgtgcggaacgccgccgacgagctc
agtgcccgcctgcacagcggcggccgctttcccggtgagtgcatggggccgagtgaatgc
ccgctgggcaagattgccggcaactaccggatgcagatactattgcgcagtcgcagcggc
ggcgatattcatacccggctgagccaggtcttgcccgggttcaagctgccgcgcgggctg
catctcgagattgatgtcgacccgattcagctgctgtag
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