Spirochaeta africana: Spiaf_1250
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Entry
Spiaf_1250 CDS
T01811
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfc03016
]
Spiaf_1250
Enzymes [BR:
sfc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Spiaf_1250
Transfer RNA biogenesis [BR:
sfc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Spiaf_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Ham1p_like
Motif
Other DBs
NCBI-ProteinID:
AFG37325
UniProt:
H9UII2
LinkDB
All DBs
Position
complement(1432369..1433922)
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AA seq
517 aa
AA seq
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MKYCLLHLGCQMNMSDSERIRSVVEAMGYERTESEEEADLLGIVACSVRQKAIDKVYSKI
SKWNDWKQERSLVTFVSGCILPTDKEKFLTRFDMLFTIQELPDFPNMLRQYGIATPLSAG
ALDASVLGHDEPDYQQHSDAGAERAADQLAASLGITTDPDKLTEADTPAGTGAATALAEV
IPPDSADPKKGYWKVKPSYQSKFDAYIPIQNGCDKFCSFCAVPYTRGREVSRPSAEILAE
VRDLVEHDYKSITLLGQNVNSYGLDRNGDEMDFPQLMREVGEIGRETGKEFWVYFTSPHP
RDMTEELLEVIAEYPVLANQIHLPIQSGDDKVLIKMHRQHNAERYRQVVANVRRILPEAT
LFTDIIVGFTGETEEQFQNTRKAIEEYRYNMAFIAMYSPRPGAASSRWADDIDQDEKKRR
LHELTEVLQQVSREHNNAMIGRTVRLLVDREDRKDGYLSGRTEGKLIVRFPVPDGIQPDH
LIGSFVDVTITAAANLSMEGELIASREPAGSRQAVEV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactgtctcctgcacctggggtgccagatgaacatgtccgattccgagcgtatc
cgctcggttgtcgaagccatggggtatgaacgcaccgaatcagaagaagaagccgatcta
ctcggcattgtggcctgctcggttcgccagaaagccatcgacaaggtctattccaagatc
tcgaaatggaacgactggaagcaggagcgcagcctggtcacctttgtctccggctgtatc
ctgccgaccgacaaggaaaaatttctgacccgctttgatatgctgttcaccatccaggaa
ctgcccgacttccccaacatgctgcggcagtacggaatcgctaccccgctctcggccggt
gccctggacgccagtgtcctgggacatgatgagcccgactaccagcagcactccgatgcc
ggcgctgaacgggccgccgaccagctggctgccagcctggggattaccaccgacccggac
aagctcaccgaagccgatacgccagcgggaaccggcgcagcaaccgccctggccgaggtc
atcccgcccgacagtgccgaccccaaaaagggatactggaaggtcaaacccagctaccag
tcaaaattcgacgcctatatcccgatccagaacggctgcgacaagttctgcagcttctgc
gccgtaccctacacccgcggccgcgaggtcagccgccccagcgccgagatcctggccgag
gtgcgcgacctggttgaacacgactataaatccatcaccctgctgggccagaacgtaaac
tcctacggcctggaccgcaacggcgacgagatggactttccgcagctcatgcgcgaggtc
ggcgagatcggccgcgaaaccggcaaggaattctgggtctactttacctcgccacatccc
cgcgacatgaccgaggaactgctggaggtgatcgccgagtaccccgtgctggccaaccag
atccacctgcccatccagagcggtgacgacaaggtactgatcaagatgcaccgccagcac
aacgccgaacgctaccgccaggttgtggccaacgtccgccgcatcctgcccgaagcaacc
ctgttcaccgacatcatcgtcggctttaccggcgaaaccgaggaacagttccagaacacc
cgcaaggcgatcgaggagtaccgctacaacatggcctttatcgccatgtactccccccgc
cctggcgccgccagctcccgctgggccgacgacatcgaccaggacgagaaaaaacgccgc
ctgcacgaactcaccgaggtactgcaacaagtcagccgcgagcataacaacgccatgatc
ggccgcaccgtacgcctgctggtcgaccgcgaagaccgcaaggatggctacctcagcggc
cgcaccgaaggcaaactcatcgtccgcttccccgtccccgacggcatccagcccgaccac
ctgatcggcagcttcgtcgacgtaaccattaccgccgccgccaacctctcgatggaaggc
gaactgatcgcatcccgcgaacccgcaggcagccgccaggcagtcgaggtgtaa
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