Spirochaeta africana: Spiaf_1294
Help
Entry
Spiaf_1294 CDS
T01811
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfc03009
]
Spiaf_1294
Enzymes [BR:
sfc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Spiaf_1294
Ribosome biogenesis [BR:
sfc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spiaf_1294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
DOT1
Methyltransf_15
PrmA
N6_N4_Mtase
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AFG37369
UniProt:
H9UIM6
LinkDB
All DBs
Position
1483154..1484416
Genome browser
AA seq
420 aa
AA seq
DB search
MPKRKRGRKRPPSIPEPREDQRVQPYCIHFDHCGGCTLQHFSYPGQLELKQGAAVHAFQR
ELLTDLPEPLDILPALQERGYRNKLEYTFSRRRWLTPEEIAGGEEFIHRDGAGFHVRGFF
DRVLDLQECHHQPEPSNRLRLFVRDTARELGISFYDISANEGDLRTLMVRTTQSGQVMAV
VMFGSDNPEQREALLSRVVAQFPELSSLYYIVNTTRNSSPIGHEQILYAGSPTITETCGT
LQLAIHPASFFQTNTGQAERLYSLVADWAALDGNQVVYDLYSGIGSIGLFLASAAQKIIG
IEVIEDAVHGARENASLNGIANADFHCGEAEKLCTPEFFASHGAPDLIILDPPRPGLHKN
LIATLREITAPRILYVSCNPSTQADDLEQLADLYRVVRRQAVDMFPQTLHVENVVELALR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgaaaacgcggccgcaaacggcccccttccatcccggaaccccgggaagat
cagcgtgtgcagccctactgcatccattttgaccactgcggcggttgtaccctgcagcac
ttttcctatcccgggcagcttgagctgaagcagggggcggcggtacacgcctttcagcgc
gaactgctcaccgatcttccggaaccactggatattctgccggccctgcaggagcgcggg
tatcgtaacaaactggagtataccttcagccggcggcgctggctcacccccgaagagatc
gccggcggcgaggagtttatccatcgcgatggcgccggttttcatgtgcgcggatttttt
gatcgggtgctggatctgcaggaatgccatcaccagcccgagcccagcaatcgattgcgg
ctctttgttcgcgataccgcccgtgagctgggaataagcttttatgatatctcagccaat
gagggggatcttcggacacttatggtgcgcactacccagtccgggcaggtgatggcagtg
gtaatgttcggttcagacaatcccgaacaacgtgaagcgctgctgtcgcgggtggtggca
cagtttcctgagctgagcagtctgtactacatagtgaataccacgcgaaactccagcccg
atcggacacgaacagatcctgtacgctggcagcccgacaattactgaaacgtgcgggacg
ctgcagctggccatacatccagcttcgtttttccagacaaataccggacaggctgagcgg
ctgtactcactggttgccgactgggctgcgctcgacgggaatcaggtggtgtacgatctg
tacagcggtatcggcagtatcggactcttccttgcctccgcggcacagaagattatcggg
atcgaggttatcgaggacgcggtgcatggcgctcgggaaaatgccagcctgaacgggatt
gccaacgcggattttcattgcggggaagcagagaagctgtgtacgcccgagttttttgca
agccatggagcaccggatctgattattctggatccaccgcgccccgggctgcacaagaat
ctgattgccacgctgcgtgagattacggcaccgcggatcctgtatgtcagctgcaatccg
tcgacacaggccgatgatctcgagcaacttgccgatctgtaccgggtagtacggcgccaa
gcggtggatatgtttccgcagaccctgcatgtagagaatgttgtggagctcgcgctgcgc
tga
DBGET
integrated database retrieval system
