Spirochaeta africana: Spiaf_1514
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Entry
Spiaf_1514 CDS
T01811
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K02584
Nif-specific regulatory protein
Organism
sfc
Spirochaeta africana
Pathway
sfc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spiaf_1514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfc03000
]
Spiaf_1514
Transcription factors [BR:
sfc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Spiaf_1514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
GAF_2
Sigma54_activ_2
GAF_3
AAA_5
HTH_8
AAA
AAA_2
AAA_16
HTH_3
DUF484
nSTAND3
RsgA_GTPase
HTH_23
HTH_37
ATPase
PNK3P
Motif
Other DBs
NCBI-ProteinID:
AFG37573
UniProt:
H9UJ80
LinkDB
All DBs
Position
complement(1730360..1731865)
Genome browser
AA seq
501 aa
AA seq
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MDFSSIDQGRFETFIEINQLINSDYSSSSALLNRIVESANRLADGEAASLLLVNPENNRL
YFEVALGSKGPEVQRFSLNPGEGIAGWVAENNRSLIVNDVDEDPRFFSDISKQVGFVTKA
ILAVPMRIKNTCVGVVEIINKRDGSRFSQEDLYWVEIFSNQAALAIQNSRSMEQARSKIQ
QLQSRASQSEFHTLIAESRAMQERLSLVDKVAPTDSSVLILGESGVGKELIAEQIHLRSR
RAGSPLIRVNCAALPEAILESELFGHVKGAFTDAHQERRGKFELADGGTIFLDEIGELPL
NVQAKMLRVIQHKVFEKVGGSQSVYVDIRIIAATNRNLEEAVRHGSFRTDLYYRLNVLPI
EIPALRDRKDDIPALALYFLDKFNRETKKQIAGFSSDAMETLLSYSWPGNVRELENTIER
AVVLCRERDIGSQDLLLAASSSERSHEYPGHNLKDAVNLFKKHFIESTLRQCGWNQTQAA
RKLDIQRTYLSRLLKELDISR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcgagtattgatcaggggcgcttcgaaacctttatcgagataaaccaactg
atcaattcggactacagcagctcgtccgccttgctgaatcgcattgtagaaagtgcgaac
cggctggcggacggggaggctgcctccctccttctggttaatccggaaaacaatcgtttg
tatttcgaggttgccctcgggtctaaaggacccgaggtgcagcgtttctctttgaacccc
ggcgagggtatcgccggctgggttgccgagaacaaccgcagccttattgtaaacgatgta
gacgaagacccacgcttctttagcgatatcagcaagcaggtcggttttgttaccaaggcc
atcctcgcggttcccatgcggataaaaaacacctgtgtgggggtagtcgagataatcaac
aagcgggacggtagccggttcagccaggaggatctgtactgggtggagatattctccaac
caggcagccctggcgattcagaactcccgctccatggagcaggcccgcagcaagattcag
caactgcagagccgggcctcacaatcggaatttcacacccttatagcagaaagtcgtgcc
atgcaggaacggctgtcgctggtcgacaaggtcgccccgacagactcttcggtgcttatc
cttggtgaaagcggcgtcggtaaggaactgattgccgagcagatccatctccgcagccgg
cgtgccggcagtccgcttatccgcgtgaactgtgccgcgcttcccgaagctattctggaa
agtgagctgtttggccatgtgaagggtgcctttacagatgctcaccaggaaaggcgtggc
aagttcgagcttgccgacggcggcaccatctttctggacgagatcggggagttgccgctg
aatgtacaggccaagatgctccgcgtcatccagcacaaggtgttcgagaaggtcgggggc
tcccagtcggtatacgtggatatccggattatcgccgccaccaaccgcaaccttgaggag
gcggtacggcacggcagtttccggaccgatctgtactaccggttgaatgtgttgccgatc
gagattcctgctttgcgggaccgaaaggacgatatcccggcactggcgctgtacttcctg
gataaattcaaccgtgagacaaaaaagcagatcgccgggttctcctctgatgcaatggaa
accctgctgtcgtactcctggcccgggaatgtacgcgaactggagaacacgattgagcgt
gccgttgtcctgtgtcgtgaacgggacataggcagtcaggatcttctgctggcagcctcc
tccagtgaacgatcccatgaataccccgggcacaatctaaaagatgctgttaacctcttt
aaaaaacattttattgaaagtacactacgacagtgcggctggaatcagacccaggcagca
cgaaagctggatatccagcgaacatatctctcccggcttcttaaagagctggatatatca
cgttga
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