Spirochaeta africana: Spiaf_1538
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Entry
Spiaf_1538 CDS
T01811
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfc03016
]
Spiaf_1538
Enzymes [BR:
sfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spiaf_1538
Transfer RNA biogenesis [BR:
sfc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spiaf_1538
Prokaryotic type
Spiaf_1538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFG37597
UniProt:
H9UJA4
LinkDB
All DBs
Position
complement(1756608..1757537)
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AA seq
309 aa
AA seq
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MNPHGLLLLYKPAGVSSFKALAPIKRSLPRRYKLGHTGTLDPFADGLLIAVVGSYTKLAD
CSHRFLKRYTAEIRFGEQTDTLDPEGEPVRSCPVPALAAEDIEHAFRKFTGTIQQVPPAH
SAVHINGRRAYALARAGQEFTIPSREVYIEQISLLHQRDDGITIDVVCGAGTYIRSLARD
LALQLGTCGHLISLTRTAIGPFQVADAVAPEAFQGNSHAMTASLQSGEATYTRFTGRPVL
QLRPEYAAPFSMGRPLQHEWFSREIPAGTDTVFGVFLPGNEFAGQIRIGDTGLMYDFVTL
QRGTTCDSQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctcatggcctgctgctgctgtacaagcccgccggggtatcctcattcaaggcg
ctcgccccgatcaaacgcagcctgcctcgcagatacaaactggggcacaccggcaccctt
gatccctttgcggatggcctattgattgcggtcgtggggagctataccaaacttgctgac
tgctcccaccggtttctgaaacgctacaccgcggaaatccggttcggtgagcagacggat
accctggaccccgagggtgagcctgtccgtagctgtccggtgccggctcttgctgctgaa
gatatcgagcatgccttccgtaaatttaccggtaccattcagcaggtgccgccagcccat
agtgcggtacacataaacggacgtcgtgcttatgccctggcacgcgccggacaggagttt
accatcccgtcacgcgaggtgtatatcgaacagatatcacttctgcaccagagagatgat
ggtataaccatcgatgtggtctgtggggcaggtacctacatccgatcactggcacgagat
ctggcgctgcagcttggcacctgcggccatctgatatcgctgacccgtaccgctattggc
ccctttcaggtggcggatgcagtagccccggaggcatttcagggcaacagtcacgccatg
actgcaagcctgcagtcaggcgaggcgacctatacccgatttaccggcagaccggttctc
cagctgcgaccggaatatgcagcccctttttccatggggcggccgctgcagcatgaatgg
ttctcccgggagatcccggctggcaccgatactgttttcggggtattcctgccaggcaat
gaattcgccggccagatcaggatcggggataccggcctgatgtacgattttgttaccctg
cagcgaggcacgacctgtgatagtcagtga
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