Spirochaeta africana: Spiaf_1546
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Entry
Spiaf_1546 CDS
T01811
Name
(GenBank) Beta-barrel assembly machine subunit BamA
KO
K07277
outer membrane protein insertion porin family
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfc03029
]
Spiaf_1546
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfc02000
]
Spiaf_1546
Mitochondrial biogenesis [BR:
sfc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Spiaf_1546
Transporters [BR:
sfc02000
]
Other transporters
Pores ion channels [TC:
1
]
Spiaf_1546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
GerPB
Motif
Other DBs
NCBI-ProteinID:
AFG37605
UniProt:
H9UJB2
LinkDB
All DBs
Position
complement(1766962..1769583)
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AA seq
873 aa
AA seq
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MHRRFALLFFLVIPLVIGAEDNDTEWYQNKPIADIVFIGLQNVDQGDLTGITSEYIGEPF
TDRRFLQLQQRLYALDYFTQIVANAERADAEGSEVIIEFTVQERPIVTEVVFEGNRRLRT
GRLNDAVVVRQGDIVSRSRVRADEAELRRLYRENGYTQVDISSRIEETDVPGEQRVVFAI
TEGRQTTIRQIQFVGNSFASDGALRGAMESKQQSLFNSGVFQESVLEQDRRRIIEYYTQR
GFIDAEIEEIRTEVDEEGSDRTHLIITIYVSEGEQYTFGGMQFRGNQVFSDDELAALVRH
REGATVNLSRVQQDFQRVSDLYYSNGYIFNEIELEQQRDSDALTVAYTVNIQEFSRAHIE
NIIIRGNTKTKDHVIERELPFEVGDIFSAGKIREGLMNLMNTGFFTSVVPDTPQGSTTGL
MDLIIDVEEGQTADIRLGVDIGGSADFPVSARVAWQDSNFRGMGQTVGAEIVASPIEQSL
SLNFREPWLMGQRWSAGANLTMRRSVQRGVLQSFPGQDTPYGSDDSYVFTEDRTFDGTDY
KAGDIFPGTPSDEEVKDLNLKTGYSHFGPSSIGDEYLMEYQNWDFILGANTGYRFLTPYG
RLNLSTNASTGLNVITYDDDLYFEPWRAEDQVPLRIRDPRIINRWRFGVNLDSRDFLISP
SSGYYVGQSVGLTGGFLLGSRHFIQTETTLEGYYTLFDLPVTDGWNWKLVAKGRSKLSTI
LPQFWVPGQSGTVLEVDRRSDLLRVNGVTIGRGWRSTDTDSNITELRGMWENTFELRMPI
NEQILWFDAFFDATFPYDELGDIRDTQFQDGLYGIGAGIRFSIPQLPISLYLARLFEIDD
DGSIAWQTGELFNRDNEEGKGLRFVLSFSTSFF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgcacagacgcttcgccttgttgttctttcttgtcataccgctggtgattggcgccgag
gacaacgacaccgagtggtatcagaacaaaccgatcgccgacatagtttttattggcttg
cagaacgtggaccagggggaccttaccggtatcaccagcgagtatatcggtgaacccttt
accgatcgaaggtttcttcagctgcagcagcgcctgtatgccctggattactttacccag
atcgtggccaacgccgaacgggctgacgctgagggcagcgaggtaataatcgagtttacc
gttcaggagcgtcccatcgttaccgaggtggtgttcgagggtaatcgacgcttgcgaacc
gggcgtctgaatgatgcggtggtggttcgccagggtgatatcgtatcacgctcccgggtc
agggctgacgaggcagagctccgtcgactgtatcgggaaaacggctatacccaggtcgac
atcagcagccgtatagaagaaaccgatgttcccggcgagcagcgggtggtgtttgccatc
acggaaggacggcagaccaccatccgccagatacagtttgtcggcaactcctttgcctcg
gacggtgccctgcgcggtgcaatggaaagcaagcagcagtcactcttcaactccggggtg
ttccaggaatcggtactggagcaggatcgtcgccgtatcatcgagtactacacccagcgc
ggttttatcgatgcggagatcgaagagatccgaaccgaggtagacgaggagggttccgac
cgtacccacctgataattaccatttacgtctcggagggggagcagtacaccttcggcggg
atgcaattcagggggaaccaggttttttccgatgacgaacttgcggcccttgtccgccat
cgcgagggggcgacggtaaacctgagtcgggttcagcaggattttcagcgggtttcggat
ctgtactacagcaatggctatatttttaacgagattgagctggaacagcagcgcgacagc
gatgcccttacggttgcatacaccgtcaacatccaggagttcagtcgggcccatatagaa
aacattattatccggggcaacaccaagaccaaggatcatgtcattgagcgcgagctcccg
ttcgaggtcggtgacatcttcagtgccggcaagattcgtgaagggctgatgaacctgatg
aataccgggttttttacctcggtagttcccgataccccgcaggggagcactaccgggctg
atggatctgattatcgatgtcgaggaagggcagaccgccgacatccgtctcggtgttgat
atcggcggcagtgctgattttccggtctcggcccgggttgcctggcaggacagcaacttc
cgcggaatggggcagaccgttggtgccgagattgtcgcctcaccgatcgagcagagcctg
tcgctgaactttcgcgaaccgtggctgatggggcagcgctggtctgccggcgccaatctg
accatgcgacgttcagtacagcgaggggtgctgcagtcttttcccgggcaggataccccc
tacggatcggatgacagctatgtgtttaccgaggaccgcaccttcgacgggactgattac
aaggcaggcgacatcttccccggcactccctctgatgaagaagtaaaagacctcaatctc
aagactgggtacagccatttcggtccctcatcaatcggtgatgagtacctgatggagtac
cagaactgggactttatcctgggggctaacaccggctaccgctttctgaccccctacgga
cggttgaatctttctaccaacgccagtaccgggttgaatgtgattacctacgatgatgat
ctctactttgaaccctggagagccgaggatcaggtgccactgcgaatccgggatccgcgt
atcatcaaccgctggcgcttcggggtaaatctggacagccgggactttcttatcagcccc
tcttccgggtactacgtcgggcagagtgttggcctgaccggtggttttctgctgggcagc
cggcactttatccagaccgagactaccctcgagggctactacaccctgtttgacctgccg
gttaccgacggctggaactggaaactggtggccaaggggcgcagcaagctctcgaccatc
ctgccgcagttctgggtgcccggacaaagcggtaccgttcttgaggttgatcgccgcagt
gatctgctgcgggtgaacggggtaaccatcgggcgcggctggcgaagtaccgataccgac
agcaacatcaccgagttgcgcggcatgtgggagaataccttcgagctgcgcatgccgatc
aacgagcagattctgtggttcgatgcctttttcgatgcaaccttcccgtacgacgagctc
ggggatatccgcgatacccagttccaggacgggctgtacggtatcggcgccggtatccgc
ttctcgatcccgcagctgccgatcagtctgtatctggcccgcttgttcgaaatcgacgat
gacggtagtattgcctggcagaccggcgagctctttaatcgtgataatgaggaaggcaag
gggctgcgctttgtgctgtcattcagcaccagctttttctag
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