Spirochaeta africana: Spiaf_1902
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Entry
Spiaf_1902 CDS
T01811
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
sfc
Spirochaeta africana
Pathway
sfc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spiaf_1902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfc03021
]
Spiaf_1902
Transcription machinery [BR:
sfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spiaf_1902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_23
HTH_10
DUF6362
RNA_pol_Rpb5_C
GerE
PTHB1_hp
Motif
Other DBs
NCBI-ProteinID:
AFG37955
UniProt:
H9UKB2
LinkDB
All DBs
Position
complement(2176195..2177034)
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AA seq
279 aa
AA seq
DB search
MKAKRNELDTDALQTYFAQIKQYALLTAEQEQQLSRQIMAGDEDAMQRLIQCNLRLVVKI
AKAYASDSQNLMDLIQEGNIGLMKAAEKFDHRKNARFSTYASWWIRQSITRAIANKRRMI
RLPHRKEDALRRIKRTALSLQQTLMRLPTTDEIAAEVGMSHEDVLEIMQFSGSTISLQAA
INEDSGTLMDIVEDYSYCPDREVMREAVHQETLQLLDGLRERERRILLYRFALLGGERST
LKCIGQRMGISPETVRQIEMRALRKLQKTAEPLYSYAHA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaaacggaatgaactggatactgatgcattacagacgtacttcgcgcagata
aaacagtacgcgttactgactgcagagcaggagcagcagctctcccgacagatcatggcg
ggtgacgaagatgccatgcagcgcttgattcaatgcaacctgcggctggtggtaaagata
gccaaggcatacgccagcgattcacagaatctgatggacctgattcaggaaggcaacatc
ggactgatgaaggccgccgaaaaattcgatcatagaaaaaatgcccgtttcagcacctat
gcatcctggtggatacggcaatctataaccagggccattgcaaacaagcgacgtatgata
cgcctgccccaccgcaaggaggatgcattgcggcgtatcaagcggacagcactgtctttg
cagcagacactgatgcgactccccaccacagacgagatcgcagctgaggttggtatgtcg
cacgaggatgtgctggagatcatgcagttttccggcagcaccatatcgctgcaggctgcc
atcaacgaagattccggtacccttatggacatcgtcgaggattattcctactgcccggac
cgcgaggtgatgcgagaggcggttcaccaggaaaccctgcagctgctggatggtctgcgt
gaacgtgagcgcaggattctgctgtaccgatttgcccttctgggcggtgaacgatctacc
ctgaaatgtatcggtcagcgcatgggtatcagccccgagacggtacgccagatagagatg
cgggcgttgcgtaaactgcagaaaaccgccgagccgctgtacagctatgcccatgcctga
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