KEGG   Spirochaeta africana: Spiaf_1976
Entry
Spiaf_1976        CDS       T01811                                 
Name
(GenBank) hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sfc  Spirochaeta africana
Pathway
sfc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Spiaf_1976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfc03019]
    Spiaf_1976
Messenger RNA biogenesis [BR:sfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Spiaf_1976
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 UPF0242 Cas3_HD dUTPase
Other DBs
NCBI-ProteinID: AFG38027
UniProt: H9UKI4
LinkDB
Position
complement(2256896..2258425)
AA seq 509 aa
MEIIGMILLPFGGVLLGWLVRWLYAKFQLSSLEQRAERLKQEAVKEAESIKNQLLLETKD
ELIEERNQQEKEFRERRGELQRFERRLLQKEENLEAKIEQVERRQQSFTDREKALQDKEQ
SLHQVEENLRNELERVSGLTIDEAKSLIIKSLEDDARHEAQGMINKIEAEARMTADKQSR
DILVTTIQRLASEVNAEVTVTSVSLPNDEMKGRIIGREGRNIRTLETLTGVDIIIDDTPE
AVVVSCFDPVRKEIARQALERLVSDGRIHPTRIEEVVHKVTHEISQSIFEEGEKALFDLG
VHHMKPEGIRGLGRLKFRTSYGQNVLAHSKEVAILSGMLAAEVGADREIAVRAGLLHDIG
KGIECDEDSNHVELGVELAKRIGEDERVINAIAAHHGDVPHSCIESVIVQVADALSASRP
GARRETLDNYIKRLENLEKIAEDFDGVDKAYAIQAGRELRIMVDHEKVTDMQAREVAKQI
ARKIEEQLRYPGRIKVTMIRETRIVEYAR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggaaatcattggcatgattctccttcctttcggcggtgtacttctaggttggctggtt
cgttggctgtatgccaagtttcagctctcatcgctcgagcagcgagcggagagacttaaa
caggaagcagtaaaagaagcggaatcaataaaaaatcagcttctgttggaaacaaaagat
gagcttattgaagaacggaaccaacaggaaaaagagtttcgcgaacgccggggggaactc
cagcggttcgagcgcaggctccttcagaaggaagaaaacctagaagcaaagattgagcag
gtagaacgccggcagcaatcattcaccgaccgtgagaaggcgttacaggataaggaacag
agtttacaccaggtagaagaaaatctccgcaacgagctggaacgggtatccgggcttacg
attgatgaggccaagtcgctgatcatcaagtcgctggaggatgatgctcggcatgaagcc
caggggatgataaacaagatcgaggccgaggctcgcatgactgccgacaagcagtcgcgt
gatatcctggttaccaccatccagcgactcgccagcgaggtgaacgctgaggtgacggtg
acctcggtaagtctccctaacgacgagatgaagggacggattattggccgtgagggtcgg
aatatccgcaccctcgagaccctgaccggtgttgacattattatcgacgataccccggag
gcagtcgtggtgtcgtgcttcgatccggttcgcaaggagattgcccgccaggcactcgaa
cgactggtgtcggatggcagaattcaccccacgcgcatcgaagaagtggtgcacaaggtg
acgcacgagatctcgcaaagtatcttcgaggaaggtgagaaggccctgttcgatctgggt
gttcaccatatgaagccggagggaattcgcggtctggggcggctcaagttccgtaccagc
tacggccagaatgtgttggctcacagcaaagaggttgccatcctgtccggcatgctggcg
gccgaggtaggtgctgaccgtgagattgcggtgcgagccggcctgctgcatgatatcggc
aaagggatcgagtgcgacgaggacagtaatcacgtagagctcggggtagagctggccaag
cggataggcgaggatgaacgggtaattaacgctattgcagcccatcatggagatgtaccg
cacagttgtatcgagtcggtgatcgtgcaggtagcggatgccttgtcggcctcgcgcccc
ggagcgcgccgggaaaccctggacaactacatcaagcgcctggagaacctggagaagatc
gccgaggattttgacggcgttgataaggcttatgctattcaggccggacgtgaactgcgc
ataatggttgatcacgaaaaggtaaccgacatgcaggcgcgagaggttgccaagcagatc
gctcgcaagatcgaggagcagctgcggtatccgggccggatcaaggttaccatgattcga
gaaacccggattgtggagtatgcccgttga

DBGET integrated database retrieval system