Spirochaeta africana: Spiaf_2489
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Entry
Spiaf_2489 CDS
T01811
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sfc
Spirochaeta africana
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfc03021
]
Spiaf_2489
Transcription machinery [BR:
sfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spiaf_2489
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
mRNA_stabil
SgrR_N
DUF134
Motif
Other DBs
NCBI-ProteinID:
AFG38520
UniProt:
H9ULX7
LinkDB
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Position
complement(2827356..2827886)
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AA seq
176 aa
AA seq
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MQREQSDGIPEFQEVYRHVFPIIYRVVLRIVNNEDAAEELVQEAFIKYYEHRERLADVAQ
AKYWLIRVSKNMALNYQKRKGREYRAYEKAFFEPKRAQETGETALLKQDSAQQVQDVLQQ
LPEKLRTVLVLKEYGGLSYKEIGAVMGIREGNVKVRVFRARERIAKLMEEGDVYIP
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagaacagagcgatggaatcccggaattccaggaagtgtacaggcacgtattc
cccattatctaccgcgtggtattgcggatcgtgaataatgaggatgccgccgaggagctg
gtgcaggaggcttttatcaagtactacgagcaccgcgagcggctggcagatgtggcgcag
gctaaatactggctgattcgggtttccaagaacatggccctgaactatcagaagcgcaag
ggtcgtgagtatcgcgcctacgaaaaggcgttttttgagccgaagcgggctcaggagacc
ggagagactgccctgctcaagcaggattcagcgcagcaggttcaggatgtactgcagcag
ttgccggaaaagttgcgcaccgtactggtgctgaaagagtatggcgggctttcctacaag
gaaatcggtgctgttatgggcatacgcgaaggaaacgtaaaggtgcgcgtgtttcgcgca
cgtgaacggattgccaagttgatggaggaaggtgatgtctacatcccgtga
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