Spirochaeta africana: Spiaf_2716
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Entry
Spiaf_2716 CDS
T01811
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfc
Spirochaeta africana
Pathway
sfc03030
DNA replication
sfc03410
Base excision repair
sfc03420
Nucleotide excision repair
sfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spiaf_2716
03410 Base excision repair
Spiaf_2716
03420 Nucleotide excision repair
Spiaf_2716
03440 Homologous recombination
Spiaf_2716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfc03032
]
Spiaf_2716
03400 DNA repair and recombination proteins [BR:
sfc03400
]
Spiaf_2716
Enzymes [BR:
sfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spiaf_2716
DNA replication proteins [BR:
sfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spiaf_2716
DNA repair and recombination proteins [BR:
sfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spiaf_2716
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spiaf_2716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFG38741
UniProt:
H9UMJ8
LinkDB
All DBs
Position
complement(3101878..3104706)
Genome browser
AA seq
942 aa
AA seq
DB search
MNQDSLFILDGYSVIYRSYFAFIRNPLRNSRGQNTSAVFGFARTIMQLFQRYEPGYFAVA
LDSIGPTFRHDRYPPYKQTRDKTPDDLTAQIPIIEELLEALGVPQIRVEGYEADDVMATC
AAVARQRDMSCYVVSGDKDLLQLVEGSVRILKPDKSGLQEMDRAGVFDAWGVYPEQILDY
LSLVGDSSDNIPGVKGIGAKTAVALLERFTTLDGIYQHLDQVTSKSQQTKLADGRENAYL
SRDLIRLVEDVQLPLELEELRTERLNLSRAVPILLREDIQSLAREMGWSETADTGAVAHP
SHADGLVSDRAADATAPSAPGLQGELPLEEVHGPSGEPPQGHVAPDNSPGSYTLVTDMAS
LEEWIERARKAGVCAIDTETDSLDEMSARLVGFSLSFAAGSGCYCPLSGPNGEVLPQQEA
LQLLASLTGDTGVVLVLQNAKYDIKVLQNHGVPLSRVGFDTMLAAWVLDAAAGSFGMDAL
AERLLGYRTTKYGDIVPKGGSFAQVELETAAGYAAEDADITLRLYHQLEPQLRSRKLERI
YYDIELPLIQVLAEMEMTGIQVDTGYLAQLSQELEGRLQRITDEIYEIVGYQFNINSTQQ
LQTVLFTERGLQPRKKTKSGYSTDVSVLQELAKEDPVPDLILQYRRLAKLKSTYVDALPK
LVNPATGRIHTHYQQTGTATGRLSSKDPNLQNIPIRDDEGRKIRAAFRPRSGWVFVSADY
AQIELVVLAHLSADPGLQRAFREGEDVHRSTGALIFQTAPDRVSAEQRRIAKTINFGVMY
GMSAFRLSRELGIPRAEADRFIEAYFATYPGIQQFVAETVQRAEQTGRSTTLLGRERSIP
AIHSRNKNEKSGAERIAVNTPIQGTAADIMKLAMLRVAEQLRAQGMQSRLLLQVHDELIL
ECPEQEVDRLRGLLEQEMTGVMELSVPLQVSVENGDSWGAMH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggacagtctctttatcctggatgggtacagtgttatctaccgatcctatttc
gcctttatcagaaatccgctgcgtaactcccggggacagaatacctctgcggtattcggg
tttgcccgaaccatcatgcagctgttccagcgctacgaaccggggtactttgcagttgcg
ctggactcgatcgggccaaccttccgtcacgaccggtatcctccgtacaagcagacgcga
gacaaaaccccggatgaccttacggcgcaaataccgattatcgaagaactgctggaggct
ctgggggtgccgcagatacgggtagagggctatgaagccgatgatgtgatggctacctgt
gccgccgttgcacggcagcgggatatgagctgctacgtggtgtccggggacaaggacctg
ctgcagctggtggaggggtcggtgcgaatcctgaagccggataaaagcgggctgcaggag
atggatcgtgccggggtgtttgatgcctggggggtgtatccggagcagatcctggactat
ctctcgcttgttggtgacagttccgacaacatacccggggtaaaggggatcggcgccaag
actgctgtcgctttgctggagcgcttcaccacccttgacgggatttaccagcacctggat
caggttacttccaaaagccagcagaccaagcttgccgatggacgggagaatgcctatctg
agccgcgatttgatccggctggtcgaggatgtacagctgcccctcgagcttgaggaactc
agaaccgagcgcttgaacctgtcccgggcagtgccgattctgctgcgggaggatattcag
tctctggctcgcgaaatgggctggagcgaaaccgctgataccggagctgtggcgcacccc
agtcacgctgatggtcttgtgtcggatcgggcggctgatgcgacagcgccatctgcacct
ggcctgcagggggagctccctctggaggaggttcacgggccgtccggggaaccgccgcag
gggcatgtcgcaccggataacagtcccggcagctacaccctggttaccgatatggcatct
ctggaggagtggatcgagcgtgcccggaaggccggggtgtgtgcaatagataccgagacc
gactcccttgatgagatgtcggcgcgtcttgtcggcttttcgctcagctttgcggcgggc
agcggctgctactgtcccctgtcggggccgaacggagaggtgctgccgcagcaagaggcc
ctgcagctgctggccagcctgaccggggataccggggtggtgctggtgctgcagaatgca
aagtacgacatcaaggtgctgcagaatcacggggtgccgctttcccgggtcgggtttgat
accatgctggctgcctgggtgctggatgccgcagctggcagtttcgggatggatgcattg
gccgagcgcctgctaggctatcgtaccacaaaatacggcgatatcgtccccaagggcggc
agctttgcccaggtggagctggagaccgctgctggttacgctgccgaggatgccgatatc
accctccgtctgtatcaccagctggagccccagctgcgcagccgcaagctggagaggatc
tactatgatattgaactgccgctgattcaggtgctggcagagatggaaatgaccggtatc
caggttgatactggctaccttgcgcagctcagtcaggagctggaggggcgcctgcagcga
atcaccgatgagatttacgaaattgtgggatatcagttcaacatcaacagtacacagcag
ctgcagaccgtgttgtttaccgaacgagggttgcaacccaggaaaaagaccaagtcagga
tactcgaccgatgtatcggttctgcaggaactggccaaggaggacccggtgccggatctg
atactgcagtaccgacgcctggcaaaactcaagtccacctatgtggatgccctgccaaag
ctggttaatcctgcaaccgggcggattcatacccattaccagcaaaccggtaccgcgacc
ggcaggctgtccagcaaggacccgaacctgcaaaacattccgatccgggatgacgagggg
cgaaagattcgtgctgccttccgcccacgcagcggctgggtatttgtaagtgccgattac
gcccagatagagctcgtggtgctggctcatctcagcgcggatcctggtctgcagcgcgcc
tttcgcgagggcgaggatgtgcaccggtctaccggggccctgatcttccagaccgcaccg
gacagggtttctgccgaacaacgacggattgccaagacgatcaatttcggggtgatgtac
ggtatgtcagctttccggttgagtcgggagctggggatcccgcgagccgaggctgatcgc
tttatcgaggcctattttgcaacctatcctggtatccagcagttcgtggccgagacggtg
cagcgcgcggagcagaccgggcgcagcaccaccctgttggggcgtgagcgcagcattccg
gctattcacagccgcaacaagaacgaaaaaagcggagcagaacgaatcgcggttaacacc
ccgattcaggggactgccgcagatatcatgaagctcgcaatgctgcgggtggcagagcag
ctgcgagcgcagggtatgcagagtcgtttgttactgcaggtacatgacgagctgattctg
gaatgccccgagcaggaggtcgacaggctgcgcgggctactggagcaggagatgaccggt
gttatggaactgagtgtgcccctgcaggttagtgtggagaatggcgacagctggggagcg
atgcactga
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