Sinorhizobium fredii USDA 257: USDA257_c00350
Help
Entry
USDA257_c00350 CDS
T02188
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase TrpS
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c00350 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c00350 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c00350 (trpS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
USDA257_c00350 (trpS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
USDA257_c00350 (trpS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c00350 (trpS)
Prokaryotic type
USDA257_c00350 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Cdc6-ORC-like_ATPase_lid
Motif
Other DBs
NCBI-ProteinID:
AFL48639
UniProt:
I3WYD3
LinkDB
All DBs
Position
37662..38957
Genome browser
AA seq
431 aa
AA seq
DB search
MISPATTPPCSRSASKSSRRRAMKPTEPWPSSPIRSAIAGTSCNPPDRCVPLDCIWPAVH
KRGDINWWALHKPDGDDMNEFKPLVFSGVQPTGNLHLGNYLGAIRKFVALQENNDCIYCV
VDLHSITAQLVHEDLPGQIRSIAAAFVASGIDPEKHIVFNQSAVPQHAELAWIFNCVARI
GWMNRMTQFKDKAGKDRENASLGLLAYPSLMAADILVYRATHVPVGDDQKQHLELTRDIA
QKFNIDFMEHIRRGGYGVDIVVGEEPIHAYFPPVEPLIGGPAPRVMSLRDGTKKMSKSDP
SDLSRINLMDDQEMIARKIRKAKTDPDALPSEVEGLKGRPEAENLVGIYAALSDRSKDEI
LAEFGGQQFSVFKPALIDLAVDVLSPITGEMRRLMDDTAHIDAILRDGGERARARAEKTM
REVREIIGFLQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcccgcgaccacgccgccatgctcgcggtcggcgtcgaagtcgtcgagacgc
cgcgccatgaagcctacggaaccgtggccgtcttcgccgatccgttcggcaatcgctggg
acctcctgcaacccgcctgaccgctgcgtgcctcttgattgcatttggcccgccgtgcat
aagcgcggcgatatcaattggtgggccctccacaagcccgatggggacgacatgaacgaa
ttcaagccgctcgtattttccggcgttcaaccgaccggcaatctgcatctcggcaactat
ctcggcgcgatccgcaagttcgtcgccctgcaggagaacaacgactgcatctattgcgtc
gtcgatctccactcgatcaccgcccagctcgtgcacgaggacctgccgggccagatacgc
tcgatcgccgcggccttcgtcgcctccggcatcgatccggagaagcacatcgtcttcaac
cagtcggccgtgccgcagcatgcggagctggcctggatcttcaattgcgtcgcccgcatc
ggctggatgaaccggatgacgcagttcaaggacaaggccggcaaggaccgcgaaaacgcc
tccctcggcctgcttgcctatccgagcctgatggcggccgacatcctcgtctaccgcgcc
acccatgtcccggtcggcgatgaccagaagcagcatctcgaactcacccgcgacatcgct
cagaaattcaatatcgacttcatggagcacatccggcgcggcggctacggcgtcgatatc
gtcgtcggcgaagaaccgatccatgcctatttcccgccggtggagccgttgatcggcgga
ccggcgccgcgcgtcatgtcgctgcgtgacggcacgaagaagatgtcgaagtccgatccg
tccgacctgtcgcgcatcaatctgatggacgatcaggagatgatcgccaggaagatccgc
aaggccaagaccgatcctgatgcgctgccgagcgaagttgaggggctgaagggccgcccg
gaggcggaaaacctcgtcggcatctatgcagccctttccgaccggtcgaaggacgaaatc
ctcgccgagttcggcggccagcaattctcggtcttcaagccggccctcatcgatctcgcc
gtcgacgttctgtcgccgatcaccggcgagatgcgccgcctgatggacgatacggcgcat
atcgacgcgatcctgcgcgatggcggggagcgtgcgcgggcgagggcggaaaagaccatg
cgcgaggttcgcgagatcatcggctttttgcagtaa
DBGET
integrated database retrieval system
