Sinorhizobium fredii USDA 257: USDA257_c00410
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Entry
USDA257_c00410 CDS
T02188
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c00410 (miaB)
Enzymes [BR:
sfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
USDA257_c00410 (miaB)
Transfer RNA biogenesis [BR:
sfd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
USDA257_c00410 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFL48645
UniProt:
I3WYD9
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All DBs
Position
42573..43973
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AA seq
466 aa
AA seq
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MTQETALLPKSPVAGDEHVPARKVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEDAD
FVLLNTCHIREKAAEKVYSELGRLRELKKTKASEGREMVIGVAGCVAQAEGNEILRRAPA
VDLVIGPQTYHRLPEALKRARSGERVVETDYAIEDKFEHLPAPDKAKTRARGVTAFLTVQ
EGCDKFCTFCVVPYTRGAEVSRPVAQIIAEAEKLVDGGVREITLLGQNVNAWHGTGPDGR
DWGLGDLLWRLGEIDGLARLRYTTSHPRDMDASLVEAHRSMAKLMPYLHLPVQSGSDRIL
KAMNRRHTAAEYLALVERIRAIQPDLALSGDFIVGFPGETEEDFEDTMRLVEAVGYAQAF
SFKYSSRPGTPGADLTDQVAEEVKAKRLERLQSLLVNQQRDFAAACVGREIDLLLEKHGR
MPGQLVGRSPWLQPVNVDAKRSQIGDIIKVRITKAGPNSLFAEVIE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccgctcttctgccgaaatcgcctgtcgcgggcgacgaacacgttccg
gcgcgcaaggtcttcgtcaagacctatggatgccagatgaacgtctatgattccgatcga
atgtccgacgccctgtcgcgggacggctatgttgcgacggacgtgctggaagatgccgac
tttgtcctgctcaacacctgtcatatccgcgagaaggcagccgaaaaggtttattccgaa
ttgggccgcctgcgcgaattgaagaagacgaaggcgagcgagggccgcgaaatggtgatc
ggcgtcgccggctgcgtcgcccaggccgagggcaacgaaatcttgcgccgcgcgccggcg
gtcgatctcgtcatcggcccgcaaacctatcaccggctgcccgaggcgttgaagcgggca
aggagcggcgagcgcgtcgtcgagacggactacgccatagaggacaaattcgagcacctg
ccggcgccggacaaggccaagacccgtgcccgtggcgtcaccgccttcctcaccgtgcag
gagggatgcgacaagttctgcaccttctgcgtggtgccctacacccgtggcgccgaggtc
tcgcggccggtggcgcagatcatcgccgaagcggaaaagctggtcgacggcggcgtgcgc
gagatcacgctgctcggccagaacgtcaatgcctggcacggaaccgggccggacggccgc
gattggggcctcggggatctgttgtggcgtctcggcgagatcgacggcctggcgcggcta
cgctacaccaccagccatccgcgcgatatggatgcgagcctggtcgaggcacaccgatcg
atggccaagctgatgccctatctgcatctgccggtccaatccgggtccgaccgcatcctg
aaggcgatgaaccggcgccatacggcggccgagtatctcgcccttgtcgagcggatccgg
gccatccaacccgatctggcgctctccggcgatttcatcgtcggcttccccggcgagacc
gaggaggatttcgaggacacgatgcgcctcgtcgaggcggtgggttatgcacaggcattc
tctttcaaatactcgagccgtcccggcacgccgggggccgatctcacggaccaggttgcc
gaagaggtgaaggccaagcgtctggaaagattgcaaagtttgctcgtcaaccagcagcgc
gacttcgccgccgcctgtgtcgggagggagatcgacctgcttctggaaaagcacggccgc
atgccgggccagctggtcggccgctcgccctggctgcagccggtgaatgttgatgcaaaa
cgatcgcaaatcggtgacattatcaaggtacgaatcaccaaggccggcccgaacagcctg
ttcgccgaggtgatcgaatag
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