Sinorhizobium fredii USDA 257: USDA257_c00610
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Entry
USDA257_c00610 CDS
T02188
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase DapE
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00300
Lysine biosynthesis
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01230
Biosynthesis of amino acids
Module
sfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
USDA257_c00610 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfd01002
]
USDA257_c00610 (dapE)
Enzymes [BR:
sfd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
USDA257_c00610 (dapE)
Peptidases and inhibitors [BR:
sfd01002
]
Metallo peptidases
Family M20
USDA257_c00610 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AFL48665
UniProt:
I3WYF9
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Position
complement(62582..63778)
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AA seq
398 aa
AA seq
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MFPTDPISNLAALIRCPSVTPAEGGALTALETMLAPLGFTVDRVVARAAGTPDIENLYAR
LGAEGPHLMFAGHTDVVPVGDEAAWTQPPFSAAIAGGKMYGRGAVDMKGGIACFVAAVAR
HIEKHGRPNGSISFLITGDEEGPAINGTVKLLEWAAGKGERWDACLVGEPTNPESLGDMI
KIGRRGSLSGRITVRGVQGHAAYPHLADNPVRGVLQLTQALMDPPFDNGTENFQPSNLEV
TTIDVGNAAVNVIPAKASAAFNIRFNDRWTAESLMAEIVARLDRAARDGALRPGRDPVKY
EIVWNERPSHVFLTRSNALIDSLSGAVEAVTGRRPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVATADLETLTEIYETFVARWFGHAADR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaccgatccgatttccaatctcgccgctctcatccgttgcccctcggtcact
ccggccgaaggcggcgcgttgacggctctcgaaacgatgctggcgccgctcggcttcacg
gtcgatcgggtcgtcgcgagggcggcgggaacgccggatatcgagaacctctatgccagg
ctcggcgccgagggcccgcatctgatgttcgccggccatacggacgtcgtgccggtcggc
gacgaagccgcctggacccaaccgcccttttctgccgcgatcgccggcggcaaaatgtac
gggcggggcgccgtcgacatgaagggcggcattgcctgcttcgtcgcggcggtcgcccgc
catatcgaaaagcatggccgtccgaacggctcgatctccttcctcatcaccggcgacgag
gaaggcccggcgatcaacggcaccgtgaaactcctcgaatgggctgctggaaaaggcgag
cgctgggacgcctgcctcgtcggcgagccgaccaatccggagagcctcggcgacatgatc
aagatcggccggcgcggttcgctttccggccggatcaccgtccgcggcgtgcagggccac
gcggcctatccgcacctcgccgacaatccggtgcgcggcgtcctgcagctcacacaagcg
ctgatggatccgcccttcgacaacggtaccgagaacttccagccgtccaatctggaggtg
acgacgatcgacgtcggcaatgccgccgtcaacgtcatcccggccaaggcgagcgccgcc
ttcaacatccgcttcaacgaccgctggacagccgagagcctgatggcggagatcgtcgcc
cggctcgatcgcgccgcgcgcgatggcgcgctccggccagggcgcgatccggtcaaatac
gagatcgtctggaacgagcggccgagccacgtcttcttgacgcgcagcaatgcgctgatc
gattcgctttccggcgcggtcgaggccgtgaccgggcggcggccgaagctctccaccacc
ggcggtacgtcggacgcccgcttcatcaaggactattgcccggtggtcgaattcggcctc
gtcggccagacgatgcacatggtcgacgagcgcgtcgccaccgccgatctcgaaaccttg
accgagatctacgaaaccttcgtcgcccgctggttcggccatgccgctgatcgatga
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