Sinorhizobium fredii USDA 257: USDA257_c01010
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Entry
USDA257_c01010 CDS
T02188
Name
(GenBank) putative transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
sfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c01010
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
USDA257_c01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c01010
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
USDA257_c01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
HTH_IclR
MarR_2
HTH_36
GntR
MarR
HTH_29
TrmB
HVO_A0261_N
UPF0154
Crp
DUF4224
DUF7343
DUF1670
Motif
Other DBs
NCBI-ProteinID:
AFL48703
UniProt:
I3WYJ7
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All DBs
Position
complement(108321..109025)
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AA seq
234 aa
AA seq
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MTEINRSPAFWRSFPIFEDFDKETLCELADIASYRKWPAGTVIFQRGDEGNYMIVVVSGR
IKLSLFTPQGRELMLRQHEAGALFGEMAVLDDQPRSADATAVTAAEGYVIGKKAFLDLIT
QKPRIAEAVIRFLCAQLRDTTDRLETIALYDLHARVARFFLATLRQIHGNELPASANLRL
TLSQTDIAAILGASRPKVNRAILSLEESGALKRTDGIVSCNVGRLLMIADPPED
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcaaccggagtcccgccttctggcggtcctttccgattttcgaagacttc
gacaaggaaaccctctgcgaacttgccgacatcgccagctaccggaaatggcccgcgggc
acggtcattttccagcgcggcgacgagggcaactacatgatcgtcgtggtttccgggcgc
atcaagctttcgctgttcacgccgcagggccgcgagctgatgctccgccagcacgaggcg
ggggcgctgttcggcgaaatggcggtgctcgacgaccagccgcgctcggccgacgcaacc
gcggtcactgccgccgagggctatgtgatcggcaagaaggcctttctcgatctcatcacc
cagaagccgagaatcgccgaggcggtcatccgcttcctctgcgcgcagctgcgcgacacg
acggaccggctggagacgatcgcgctctacgatctccacgcccgcgtcgcacgcttcttc
ctggcgacgctccggcagatccacggcaacgaactgccggcaagcgccaatcttcgcctg
acgctgagccagaccgatatcgccgccattctcggcgccagccggccgaaggtgaaccgt
gccattctctcgctggaggaaagcggcgctctcaagcggacggacggcatcgtctcgtgt
aacgtgggacgcctgctgatgatagccgatccaccggaggactag
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