Sinorhizobium fredii USDA 257: USDA257_c01130
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Entry
USDA257_c01130 CDS
T02188
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00061
Fatty acid biosynthesis
sfd00071
Fatty acid degradation
sfd01100
Metabolic pathways
sfd01212
Fatty acid metabolism
sfd02024
Quorum sensing
sfd04146
Peroxisome
Module
sfd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
USDA257_c01130 (fadD)
00071 Fatty acid degradation
USDA257_c01130 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
USDA257_c01130 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
USDA257_c01130 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfd01004
]
USDA257_c01130 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfd04147
]
USDA257_c01130 (fadD)
Enzymes [BR:
sfd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
USDA257_c01130 (fadD)
Lipid biosynthesis proteins [BR:
sfd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
USDA257_c01130 (fadD)
Exosome [BR:
sfd04147
]
Exosomal proteins
Exosomal proteins of breast milk
USDA257_c01130 (fadD)
Exosomal proteins of breast cancer cells
USDA257_c01130 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFL48715
UniProt:
I3WYK9
LinkDB
All DBs
Position
complement(120357..122057)
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AA seq
566 aa
AA seq
DB search
MAEASMQQAGSGAGKNWIKSYPPGVPAEIGPLPYRSLGEFFDHAVAQHSWRPAFTCMGKS
LTFADLNVHSGRIGAWLQSLGLAKGDRVAVMMPNILQNPVIVYGILRAGYTVVNVNPLYT
PRELEHQLVDAGAKAIFVLENFAHTVEQVVARTKIKHVVVATMGDMLGVKGLVVNVVVRR
VKKLVPAWSLPGHLSFRTVLAKGEKLSLAKPNVAPGDVAFLQYTGGTTGVSKGATLTHAN
LLSNMAQMGIWLNTAFLRKPRPENLTFMCALPLYHIFALTVNSLMGLATGGNNILIPNPR
DIPAFVQELAKYKTNIFPGLNTLFNALMNNPEFQKLDFSSLILTFGGGMAVQRPVAERWL
ATTHCPIHEGYGLSETSPVATANRLDTDEFTGTIGMPLPSTEVEIRDDDGNTLPTGEIGE
ICIRGPQVMAGYWQRPDETAKAISPDGFFRTGDIGFMNAAGLTKIVDRKKDMILVSGFNV
FPNEIEEVVATHPGILECAAIGIADPHSGEAVKLFVVRKDPNLTEGDVKRHCAEHLTNYK
RPRHVEFRDELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcaagcatgcagcaggcggggtccggcgcggggaaaaactggatcaagtcc
tatccgccaggtgtgcccgccgagatcggaccactcccctaccgatcgctcggcgagttc
ttcgaccatgcggtggcgcagcattcctggcggcccgctttcacctgcatgggcaagtcg
ctgaccttcgccgatctcaacgtccattcgggtcgaatcggcgcctggctgcagtcgctc
ggtctggcgaaaggcgatcgcgtcgccgtcatgatgccgaacatcctgcagaacccggtg
atcgtctacggcatcctcagagccggctacacggtcgtgaacgtcaacccgctctacacg
ccgcgcgagctcgaacaccagctggtcgatgccggcgccaaggcaatcttcgtcctggaa
aacttcgcccatacagtcgagcaggtcgtcgcccggaccaagataaagcatgtggtggtc
gcgacaatgggcgacatgctcggggtgaagggcctggtcgtcaacgtcgtcgtgcgccgc
gtcaagaagctcgttccggcctggtcgctgccggggcacctctccttccggactgttctt
gccaagggcgagaagctttcgcttgcgaaacctaatgtcgcgcctggcgatgtcgccttc
ctgcaatatacaggcggcacgaccggcgtttccaagggtgccaccctcacccatgccaat
cttctgtccaacatggcccagatggggatctggctaaacacggccttcctgcgcaagccg
cggccggaaaacctcaccttcatgtgcgccttgccgctctatcacatcttcgcgctgacg
gtgaattcgctcatggggctcgcgaccggcggcaacaacatcctgatccccaacccgcgc
gacattcccgccttcgtccaggagttggccaagtacaagaccaacatcttccccgggctc
aatacgctgttcaacgcgctgatgaacaatccggagttccagaagctcgacttttcatcg
ctgatcctgacattcggcggcggcatggcggtgcagcgaccggttgcagagcgctggctc
gccacgacgcactgcccgatccatgaaggctatgggctttcggaaacttccccggtcgcc
accgccaaccggctcgacacggacgagttcaccggcacgatcggcatgccgctgccatcg
accgaggtcgaaatccgcgatgacgacggcaatacgctgccgaccggcgaaatcggcgag
atctgcatccgcggcccgcaggtcatggccggctattggcagcgccccgacgagacggcg
aaagcgatttcgccggatggtttcttccgcaccggcgacatcggcttcatgaacgccgcg
ggactgacgaagatcgtcgaccgcaagaaggacatgatcctcgtttccggcttcaacgtc
ttcccgaacgagatcgaagaggtcgtggcaacccaccccggcatcctggaatgcgccgcc
attggcatcgccgacccgcattccggcgaggcggtcaagctcttcgtcgtgcgcaaggat
ccgaacctcacggaaggggacgtaaagcgccactgcgccgaacacctcaccaactacaag
cggccgagacacgtagagttccgcgacgaactgccgaaatccaatgtcggcaagattctg
cgcaaggacttgcgcggctaa
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