Sinorhizobium fredii USDA 257: USDA257_c01820
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Entry
USDA257_c01820 CDS
T02188
Symbol
secDF1
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02024
Quorum sensing
sfd03060
Protein export
sfd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
USDA257_c01820 (secDF1)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
USDA257_c01820 (secDF1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
USDA257_c01820 (secDF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfd02044
]
USDA257_c01820 (secDF1)
Secretion system [BR:
sfd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
USDA257_c01820 (secDF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
AFL48782
UniProt:
I3WYS6
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Position
197333..199867
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AA seq
844 aa
AA seq
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MRTSRWAVLAYVAIIIFGCLAAVPSVLTPAMREQFASVLPFKPVTLGLDLRGGSHLVLEV
DGAGLQKARLNSLLDDTRRVLRGERVSASSARISGNSVTVSVTDAADREKVLPKLQELAA
PVGTVGFGGSAAELEVTTNGDVIALAMTEAGLSDRMTKAVEQSLEIIRNRVDQVGVAEPL
IQRIGSDRILVQLPGLQDPTRLRELLGSTAQMSFHMLDQTADVTQPAPRGVDILPGANDG
NKYPVESRIAISGERLEDAKVGFDQRTNQPVVDFAFDSLGARQFADITRENVGRPFAIVL
DGKVLTAPVINEPILGGRGQISGNFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGS
DSIRMGLYTGLAGFGLVVTLMVVLYGAWGMIANVGLVLHTIMTIGVLGLIGSTLTLPGIA
GIILGIGMAVDANILINARIREETEAGAGAMKALDVGFNKAYATILDSNVTTLAGTVLLF
WLGSGPVRGFAVTMMLGIVISMFTSVTVVRLLMREVVVRRKMKKLEIPSLFGRVPHLPTF
SFMKRRFQAIGFSAFLSISSVILFFTPGLNYGIDFIGGIQVEAVSKEKIDLPTLRHSLEE
LNLGEVALQDFGGGQSVLIRVQRQPGGEQEQTAALSRIKDAVTTAIPGAALERTEVVGPT
VSGELARSGFLAVGLAMVAILLYIWFRFEWHFAVGAIAVLLLDITKTVGFFALTGIDFNL
TAIAALLTMIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDMSINQVIARCIFTSMATAL
SLVPMAIWGGEAVQSFAWPMIFGVIVATTSSIYIGGPILLFLSRWWKDREASRSGAQQPG
APAA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatccagatgggcggttctcgcctatgtcgcgatcattatcttcggatgcctc
gcggcggtgccgagcgttctgacgccggccatgcgggagcaattcgcttccgtccttccc
ttcaagccggtcaccctcggcctcgaccttcgaggcggttcgcacctcgtgctcgaggtc
gacggggcggggcttcagaaggctcgcctcaactcgctcctcgacgacacccggcgcgtt
ctgcgcggcgagcgtgtctccgcctcttcggcgcgcatcagcggcaacagcgtgacggtg
agcgtcaccgacgctgccgatcgtgaaaaggtgctgccgaagctgcaggaactcgcggca
cccgtcggtacggtcgggtttggcggctccgctgctgagctcgaggtcacaacgaacggc
gacgttatcgcgctcgccatgacggaggcaggcctttccgatcgcatgacgaaggcggtc
gagcagagtctcgaaatcatccgcaaccgcgtcgaccaggtcggtgtcgccgagccgctg
atccagcgcatcggctcggaccgcattctcgtccagctgccgggcctccaggatccgacg
cgccttcgcgagctcctcggctcgacggcgcagatgagcttccacatgctcgaccagacc
gccgatgtcacgcagccggctccgcgcggcgtcgatatcctgccgggcgccaatgatggc
aacaaatatccggtcgaaagccgcatcgcgatttccggcgaacggctcgaagatgcgaag
gttggcttcgaccagcgcacgaaccagccggtggtggatttcgccttcgactcactcggc
gcccgccagttcgccgacatcacccgtgaaaacgtcggccgtccctttgccatcgtcctc
gatggcaaggtcctgacggcgccggtcatcaacgaaccgattctcggcggccgtggccag
ataagcggcaacttcacggtcgaggaggcaacggtcctctccgcgctgctgcgctccggc
gccctgccagcgccgcttaccatcatcgaagagcgctcggtcggaccgaacctcggcagc
gactcgatccgcatgggtctctacacgggtcttgccggtttcggcctcgtggtgacgctg
atggtcgtcctttacggcgcctggggcatgatcgccaatgtcggcctggtgcttcacacg
atcatgacgatcggcgttctcggcctgatcgggtcgacgctgaccctgcccggcatcgcc
ggtatcattctcggcatcggcatggcggtcgacgccaacatcctgatcaacgcgcgtatc
cgcgaagaaacggaagcgggcgccggtgcgatgaaggcgctcgatgtcggcttcaacaag
gcctatgcgacaatcctcgattccaacgtcacgacgcttgccggcacggtcctcttgttc
tggctcggcagtggtccggtccgcggcttcgcggtcaccatgatgctcggcatcgtcatc
tcgatgttcacctcggtcaccgtcgtgcgcctgctgatgcgcgaggtcgtcgtgcgccgc
aagatgaagaagctggaaatcccgtcgctcttcgggcgcgtcccgcatctgccgaccttc
tccttcatgaagcgtcgcttccaggccatcggcttctcggccttcctgtcgatcagctcg
gtcatcctgttcttcacgcctggcctcaactacggcatcgatttcatcggcggcatccag
gtcgaggcggtgtcgaaggaaaagatcgacctgccgacgctgcgccacagcctcgaagag
ctcaatctcggcgaggtggcgttgcaggacttcggcggcggccagtcggtgcttatccgc
gtccagcgtcagccgggcggtgagcaggagcagacggcggcgctgagcaggatcaaggat
gcggtgacgacggcgatcccgggggccgcgctggaacggaccgaggtcgtcggtccgacg
gtcagcggtgagctggcgcgctcgggcttcctcgccgtcggcctcgccatggtggcgatc
ctgctctacatctggttccgcttcgaatggcacttcgccgtcggcgcgatcgcggtgcta
ttgctcgatatcaccaagaccgtcggcttcttcgcgctgaccggcatcgacttcaacctg
acggcaatcgccgcattgctgacgatgatcggctactcggtgaacgacaaggtggtcgtc
tacgaccgcatgcgcgagaacctgcgcaagtacaagtcgatgccgttctccgatctcatc
gacatgagcatcaaccaggtgatcgcgcgatgcatcttcacctcgatggcgacggcgctt
tcgctggtgccgatggcgatctggggcggcgaggcggtacagagcttcgcgtggccgatg
attttcggcgtcatcgtcgcgacgacgtcgtcgatctatatcggtgggccgatcctcctg
ttcctcagccgctggtggaaggatcgcgaagccagccgttcaggcgcgcagcagcccggc
gcgccggcggcctga
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