Sinorhizobium fredii USDA 257: USDA257_c01900
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Entry
USDA257_c01900 CDS
T02188
Symbol
ctrA1
Name
(GenBank) capsule polysaccharide export outer membrane protein CtrA
KO
K01991
polysaccharide biosynthesis/export protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c01900 (ctrA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c01900 (ctrA1)
Transporters [BR:
sfd02000
]
Other transporters
Pores ion channels [TC:
1
]
USDA257_c01900 (ctrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AFL48790
UniProt:
I3WYT4
LinkDB
All DBs
Position
215127..216314
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AA seq
395 aa
AA seq
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MKRVTALLLCTALAGCQAVPGEGPLTSAIVAEAGQSGSEIGRRNATVFDIIDIDGQSARL
VSEYVATTLSRRFGIGGGVGQVVIGVGDQLKVTIFEAGSDGLFSTTESKQTSIDLVVQPD
GKAAIPYVGSVRFAGLTLEQARQAILDALKQKAVEPDVIVTSTSTASRIVTVSGAVGRPS
VVPLNLVSETINEVIAKAGGPSAQPYETYVTLVRGKKTGTVLLKSIIESPSENIHVKQGD
QIFVTRDPRTFTILGQVRANQRVEFGANDLNLLEAVALAGGGADRTIDAKGYFVFRYEEP
DIVMSLLGRERFNTMLSKGMQPDRVGRYPIVYRFNMTNPDSLIVGQTFPIKNRDVIYASR
HPSVDISKFMEFIARPIGIANSGVSIADNLNDLNN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgagtgactgcccttctgctttgtaccgcacttgcgggatgtcaggctgtaccg
ggcgaggggccactgacaagcgccatcgtcgcagaagccggccagtcgggatcggagatc
ggcaggaggaacgccaccgttttcgacatcatcgatatcgacggccagtccgcacggctc
gtttccgaatatgtggcgacgacgctgagccgccgcttcggcattggcggcggggtcggc
caggtagtgatcggcgtcggcgaccagttgaaggtcaccatcttcgaggcgggcagcgac
ggcctgttttccacaacggaatcgaaacaaacgagcatcgacctcgtcgtccagccggac
ggcaaggcggcaatcccctatgtcggctccgttcgcttcgccggcttgacgctggagcag
gcgcgccaggcgatcctcgacgcgttgaagcagaaggccgtggagccggacgtcattgtc
accagcacctcgaccgcgtcgcgcatcgtcaccgtctccggcgccgtcggccgcccgtcg
gtggtgccgctcaatctcgtcagcgaaacgatcaacgaggtcatcgccaaggccggtggt
ccctcggcgcagccctacgagacctatgtcacgctggtgcgcggcaagaagaccggaacg
gttctgctgaagtcgatcatcgagagcccgtcggaaaacatccatgtcaagcagggcgac
cagattttcgttacccgcgacccgcgcaccttcacgatcctcggccaggtgcgggccaac
cagcgcgtcgaattcggcgccaacgatctgaacctgctcgaagccgtggcgctggccggc
ggcggggcggatcgcaccatcgatgcgaagggctatttcgtcttccgctacgaggagccg
gacatcgtcatgagcctgctcggccgggagcgtttcaacacgatgctgagcaagggcatg
cagcccgacagggtcggccgctatccgatcgtctaccgtttcaacatgacgaaccccgac
agtttgatcgtcggacagaccttcccgatcaagaaccgcgacgtcatctacgcctcgcgc
cacccctcggtcgacatctccaagttcatggaattcatcgcgcggccgatcggcattgcg
aattccggcgtcagcatcgccgacaacctgaacgatctcaacaattga
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