KEGG   Sinorhizobium fredii USDA 257: USDA257_c02030
Entry
USDA257_c02030    CDS       T02188                                 
Name
(GenBank) putative type I restriction enzyme hindVIIP R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sfd  Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfd02048]
    USDA257_c02030
Enzymes [BR:sfd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     USDA257_c02030
Prokaryotic defense system [BR:sfd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   USDA257_c02030
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII T1R_D3-like DEAD PAH_ZNF598 HEAT_ULK4
Other DBs
NCBI-ProteinID: AFL48803
UniProt: I3WYU7
LinkDB
Position
complement(227194..230406)
AA seq 1070 aa
MADTPKDIHYGIPEGTRATLTGFSEDGLVEKPAIELLESLGWSHFNLYVETFGPDGSPFR
DTLRDPYLTKTLRTALARLNPDLTPDALDLAFDTLTQDRASMVPMAANREVLELVRDGVD
VEYRDEDGGMAKERVRVIDWRDLNANDFTLISQVWISGELHRRRTDLIGFVNGVPLLFIE
LKAGHRRIEDAYRDNVRDYRDSIPQLFGPNGFVLVSNGLDTRIGASAYSPWDTFKEWKRV
DDETEPGRVSLETAIRAAATPERLIDLVENFLVFEETKDGLVKKIVQNHQFLGVNKAVQA
VVNLGENRGKLGVFWHTQGSGKSLSMLTFTRKVLRTIPGAWTFVIVTDREELDKQISDVF
AACGAVTKDVREVRAGSKEHLKTLLRGNERFVFTLIHKFGTAKGETFPILSDRSDIIVIA
DEAHRSQYDTLAANMRRALPNAAFIGFTGTPLMAGEEKTRDVFGDYVSTYTYQQSTEDGA
TVPLYYENRIPELEFANESFAEDVEAVIEEADLDEEQERELEKRLGTQYHLITREDRLDR
IAEDLVRHFVGRGYRGKAMFVAIDKATAVRMYDKVRRAWDAEIGRRDAALASASSDEREA
LAAIVAFMRETDMAVVVSQGQNEIADMEAKGLDIRTHRRRMIEEDLDERFKKGSDPLRLV
FVCAMWITGFDVPTCSTIYLDKPMKNHTLMQTIARANRNAPGKKAGLIVDYVGIFRNLEK
ALAIYAVGGATNAKPIEDKSALVEDLAQAIEDALVFCRARNVDPSAILEVTGFDRLARLG
DAVEALNGTDPERRTFLALATNVWSTFKSVLPDARAEPYRRVSAAIEVIAERIRSLAERP
DISEVANRIEALLDNSIAGVEITAPIRENGDTEGLFDLSRLDIERLRAMFAQNNRQRTET
QRLRRAVEDRLEEMAARNPTRRGLVERFETLIAAYNAGSLTAADFFEQLLALVGDMNAED
QRAIREGLTEEELAIFDILTQPEPKLGPEDEDLVKRVAKSLLEKLRAEKLVLDWRLKERA
KAAVKAAIQQLYDDGLPQVYGQGIFDEKVERTYQWVFEKYPGGSETSTVQ
NT seq 3213 nt   +upstreamnt  +downstreamnt
atggccgacaccccgaaggacatccactacggcattcccgagggcacccgcgccaccctg
accggcttctccgaggacgggctggtcgagaaaccagcaatcgagcttctggagagcctc
ggttggagccacttcaatctctatgtcgaaaccttcggccctgacggctcgccgtttcgc
gacacgctgcgcgatccctatctgaccaagacgttgcgcactgcgcttgcccggctgaac
cccgacctgacaccggatgccctcgaccttgccttcgacaccctgacgcaggaccgcgca
tcgatggtgcctatggccgcgaaccgcgaagttctggaactggtgcgggatggggtcgat
gtggaataccgcgacgaagacggcggcatggcgaaggagagggtccgcgtcatcgactgg
cgcgatcttaacgccaatgacttcaccctgatttctcaggtctggatctcgggcgaactt
caccgccgccgcacggatctgatcggctttgtcaacggagtgccgctgctattcattgag
ctgaaggccggacaccggcggatcgaggatgcctatcgcgacaatgtccgcgactaccgc
gacagcattccgcagctcttcggtcccaatggctttgttctggtctccaatgggctcgac
acccggatcggcgcatcggcctactccccatgggataccttcaaggaatggaagcgggtc
gacgacgagaccgaaccgggccgcgtatcgcttgaaaccgccatccgggccgccgccacg
cccgaacgcctgatcgaccttgtcgagaacttcctcgtcttcgaggagaccaaggacggc
ctcgtcaagaagattgtccagaaccatcagtttctcggggtgaacaaggcggttcaggcc
gtcgtcaacctgggggagaaccggggcaagctcggggtcttctggcacacgcaaggctcc
ggcaagagcctttccatgctgaccttcacgcggaaagttctgcgcacgatccccggggcc
tggaccttcgtgatcgtcaccgaccgcgaggaactagacaagcagatttcggacgtcttc
gccgcgtgtggcgctgtgaccaaggacgtgcgcgaggtccgcgccgggtccaaggagcat
ctgaagacgctactgcgtggcaacgagcgcttcgtcttcacgctcatccacaaattcggc
acggccaagggcgagacctttccgatcctctccgatcggtcggacatcatcgtcatcgcc
gacgaggcccatcgctcgcaatatgacacgctggccgccaacatgcgccgcgccctgccg
aacgccgccttcatcggctttaccggaacacccttgatggcgggggaagagaagacccgt
gacgtcttcggcgactatgtctcgacctacacctaccagcagtcgaccgaggacggagcc
acggttcctctctactacgagaaccgcatccccgagctggagttcgctaacgagagcttc
gcggaggatgtggaagccgtcatcgaagaggccgatctcgacgaggagcaggagcgggaa
ctcgaaaaacgcctcggcacccaataccacctgatcacccgcgaggaccggctggatcgg
attgccgaggacctcgttcgccacttcgtcggtcgcggctatcgtggcaaggccatgttc
gtggcaatcgacaaggcaacggcagtgcggatgtacgacaaagttcgccgtgcttgggat
gccgagataggacggcgcgacgcagcccttgcttcagcctcctccgacgagcgcgaggct
ttggccgctatcgtcgccttcatgcgcgagacggacatggccgtcgtggtcagccaaggc
cagaacgagatcgccgatatggaggccaagggcctcgacattcgcacccacaggaggcgg
atgatagaagaggatctggacgagcggttcaagaagggcagcgatccgcttcgactagtc
ttcgtttgcgccatgtggatcacgggcttcgacgtgccgacttgctcgaccatctacctc
gacaagccgatgaagaaccacacgctgatgcagaccatcgcccgtgccaaccgcaatgcg
ccgggcaaaaaggccggtctgatcgtcgactatgtcggcatcttccgcaatttggagaag
gcgctcgcgatctatgcggttggcggtgcaaccaatgccaagccgatcgaggacaagtcc
gctcttgtcgaggaccttgcccaagccattgaggacgccctcgtcttttgccgtgcccgg
aacgtcgaccctagcgcaatccttgaggtgacagggttcgacaggctggcgaggctcggc
gatgcagtggaagcgttgaacggcaccgatccagagcggcgcacctttcttgcgctggcc
accaatgtctggagcacgttcaaatctgttctcccggatgcccgggccgagccctaccgg
agggtctctgccgccatcgaggtgatcgccgagcgtattcgttccctggccgaacgcccg
gacatttccgaagttgccaaccggattgaggctctcctcgacaactccattgcgggtgtc
gagatcaccgcgccgatccgcgagaacggcgatacagagggcctgttcgacctgtcccgt
ctcgacattgagcgactgagggcaatgttcgcacagaacaaccgacagcgcaccgaaact
cagcgcctccgtagggctgtcgaagatcggttagaggaaatggccgcgcgaaaccctacg
cgacgtggcctcgtcgagcgcttcgaaacgctgatcgccgcatacaacgccggaagcctc
accgccgccgactttttcgaacagctactcgcccttgttggcgatatgaacgccgaagat
caaagggcgatccgcgaggggctcaccgaggaagaacttgcgatcttcgatatcctgacc
cagccggaaccgaagctcggtccggaggatgaggacctcgtcaaacgtgtggcaaagtca
ctgctggagaagctcagggctgagaagctggttctcgactggcgactgaaggaacgtgcg
aaagctgccgtcaaagccgcgatccaacagttgtacgacgacggcctcccccaggtatat
gggcaaggcatcttcgacgagaaggtcgagcgaacttaccagtgggtgtttgagaagtac
ccgggcggatcggaaacaagcacagttcagtga

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