Sinorhizobium fredii USDA 257: USDA257_c02630
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Entry
USDA257_c02630 CDS
T02188
Name
(GenBank) hypothetical protein
Organism
sfd
Sinorhizobium fredii USDA 257
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFL48861
UniProt:
I3WZ05
LinkDB
All DBs
Position
complement(292835..297898)
Genome browser
AA seq
1687 aa
AA seq
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MTSIISSLSVNQIKSLSTTVIASLTTTDVAAMTTAQVKALSSTQIAALDTEDVATFTTAQ
LSAISATSVAGISLDQLAAIDAAKIASLATSQVAALSSAQIDGLTSDQAEALTTAQVAAL
TSTQIAALSSEDVTAFSTAEIAAISVTALAGLSTDNLAALSTDQAAALKTTQVAALKTAQ
VAALTTDQVTALTSSQVAVLSSTQLKALSTDHIAALSTDQIAVLNSKSVAALTSTQIGAL
TSDQAEALTTAQVAALTSTQIAALASEDIAAFSTADIAAITVTALTGLTTDNVAALSTDQ
AAALKTTQVAALKTAQIAALTSDQVVALTSSQVGVLTSAQISALTTDNVAALSTDQVAAL
NSKTVAALSSAQIGALSSDQVEALTAVQIAALDSADIAALASEDIATFSTSEIAAITATA
LSGLSTGNVAALSTDQTAALKTSQLAALKTTQIAALTSDQVVALTSSQVGALSSTQVSAL
STDNVAALSTDQVAALNSKAIAALTSAQIGALSSDQAEALTTAQVAALTSTQIAAFASED
IAAFSTADIAAITVAALAGLSTDNVAALSTDQAAALKTTQVAALKSTHIAALTSDQVTAL
TSSQVGALTSTQVKALSTDNVAALSTDQVAALNSKSVAALSSAQVEALSSDQAEALTTAQ
VASLSSTQIAAFASEDIAAFSTADIAAITVTALTGLSTDNVAVLSTDQAAALKTTQVAAL
KTAQIAALTSDQIAALSSSQVGALTSSQVSAISTDNIAALSTDQVAALNSKTVSALSSAQ
IEALSSTQVEALTSVLVGALSSTQLAALASEDIATFSTADIAAISVAALAGLSTDNVAAL
STDQAAALKTTQVAALKSTQIAALTSDQIAALSTTQVGALTSTQASAIGTDSLAALSTDQ
VAALNTKTLASLTTVQIDAMSSDQLEALTSGQVAALTMAQLGALASEDIATFSTADIAAI
TVAALAGLSTDNVAALSTDQTAALKTTQIAALKTAQIGALTSDQVVALTSSQVGALSSTQ
ISVLSTDNVAALSTDQVAALNSKTVAALTSVQIDALSSDQAEALTTAQVAALGSTQLAAL
ASEDLATFSTADIAAITVSALGGLSTDNLAVLSTDQAAALKTTQVAALSTAQIAALTSDQ
LTALTSSQVGALTSTQVKALSTDNVAALSTDQVAALNSKSVAALTSTQIEALSSDQAEAL
TMAQVAALTSTQIAALASEDIGTFSTADIAAITVTALAGLSTDNVAALSTDQAAALKTTQ
VVALKTAQIAALTSDQVAALTSSQVGALTSAQITALSTDNVAALSTDQVAALNSKTVAAL
SSAQIGALSSDQAEALTSAQIAALDSADIAALASEDIATFSTSEIAAITATALSGLTTDN
VAALSTDQAAALKTGQVAALSTAQIAALTSDQVTALTSSQVGVLSSAQITALSTDNVAAL
STDQVAALNSKTVAALTSAQIEALSSDQAEALTTAQVAALGSAQLAALASEDLGTFSTAD
IAAITVTALTGLSTDNLAALSTDQASALKTTQVAALSTAQIGALTSDQVAALTSAQIGAL
TSTQLAALSTDNVAALTTDQVAALSTKVIGALSSDQIDALSSTQVEALTSAQVAALDSAD
IAALSTEDLATFSTADIAAISTTALAGLSTDDILSLSSDQLLAVTSTQVEALDGSQVEAI
IAAYQAI
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatcatctcttctctgagcgtcaaccagatcaagtctctgtcgacgaccgtc
attgcctctctgaccacgacagatgttgcggcaatgacgaccgcccaggtcaaggcactc
tcctcgacccaaatcgcggcgctcgataccgaggatgtcgcgaccttcaccaccgcacaa
ttgagcgccatttcggcaacctccgtcgctggcatcagcctcgaccagttggcagccatc
gatgcggccaagattgcaagcctcgcgacgtcccaggtagcggctctgagctcggcacag
atcgacggattgacctccgaccaggccgaggctctgaccacggcgcaagtggccgccctc
acctcgacgcaaatcgcggctttgagctcggaagacgtcaccgccttctcgaccgccgag
atcgcggcgatctccgtcaccgcgctcgcaggtctctccaccgacaatctcgcggccctg
tcgaccgaccaggccgctgcgctgaagaccacccaggtcgcagcgctgaagaccgcccaa
gtcgccgccctcacgacggaccaggtcacggcgctcacctcgtcgcaggtcgcagtcctg
agctcgacgcagttgaaggccctgagcaccgaccatattgccgcgctctccaccgaccag
atcgcagtactcaactcgaagagcgtcgcagctctgacttcgacacagatcggcgcgctg
acgtccgaccaggctgaggctctgaccacggcacaagtcgctgcgctgacctcgacgcag
attgcagctctggcctcggaggatattgccgccttctcgaccgccgacattgcggcaatc
acggtcacggcgctgacgggtcttaccaccgacaatgttgcggcactgtctacagaccag
gccgcggcattgaagaccacccaggtcgcagcgctgaagaccgcccagatcgccgccctc
acctcggaccaggtcgtggcgctcacctcgtcgcaggtcggcgtgctgacctccgcgcag
atttcggcgctcaccaccgacaatgtcgccgcactctccaccgaccaggtcgcagccctc
aactcgaagactgtcgcagcgctgagctcggcacagatcggcgccctgagctccgatcag
gtcgaggcgctgaccgccgtacagatcgccgcgctggattcggccgatattgcggccctc
gcttccgaagatatcgcaactttctcgacctcggagattgcggctattaccgcgactgcc
ctgtcgggtcttagcaccggcaatgtcgcggcgctctccaccgatcagaccgcagcgctg
aaaaccagccagctcgcagcgctgaagacgacgcagattgccgccctcacctccgaccag
gtcgtggctctcacctcgtcccaggtcggagccctgagctcgacccaggtttcggcgctc
tccaccgacaatgtcgcggcactctccaccgatcaggtcgcggcgctcaattcgaaggcg
atcgcggcactgacttcggcacagatcggcgccctcagctccgaccaggccgaggccctg
accacggcacaagtggcggcgctgacctcgacgcagattgcggctttcgcctcggaggat
atcgccgccttctcgaccgccgacattgcagcgatcaccgtggccgcgctcgcaggtctt
tccaccgacaatgtcgccgcactctccaccgatcaagccgcggcgctgaagactacccag
gtcgcagcgctgaagtccacgcatattgccgcccttacctcggatcaagtcacggcgctc
acctcgtcccaggtcggagccctgacctcgacgcaagtgaaggcgctctccaccgacaat
gtcgcggcgctctccaccgaccaggtcgcagccttgaactcgaagagcgtcgcagcgctg
agctcggcacaggtcgaagccttgagctcggatcaggctgaggccctgaccacggcacaa
gtggcatcgctcagctcgacgcagatcgcggcttttgcctcggaggatattgccgccttc
tcgaccgccgatatcgcggcaatcacggtcactgcactgaccggccttagcaccgacaat
gtcgcggtactctccaccgaccaggccgcagcgctgaagaccacccaggttgcagcgctg
aagaccgcccagatcgccgccctcacctcggaccagattgccgccctgagctcctcccag
gtcggagcgctgacatcgtcgcaggtgtccgcaatcagcaccgacaatattgcggctctc
tccacggaccaggtggcggcactgaactcgaagaccgtctcggccctaagctcggcacag
atcgaagccctgagctccacccaggtcgaggctttgacctcggttcttgtcggcgcgctc
agctcgacacagctggccgccttggcgtcggaagacatcgcaaccttctcgaccgccgac
attgcggcgatttctgtggccgcgctcgcgggtctcagcaccgacaatgtcgcggcactg
tccacggatcaagccgcagccctgaagaccacccaggtcgcagcgctgaagagcacgcag
atcgccgcccttacctcggaccagatcgccgccctgagcaccactcaggtcggcgcgctg
acctcgacgcaagcgtccgcgatcggcaccgacagcctcgcggcactttccaccgaccaa
gtcgcggccctcaacaccaagaccctggcgtctttgacgacggtgcagatcgacgccatg
agctccgatcagctcgaagcactgacttcggggcaggtcgccgctttgaccatggcacaa
ttgggtgctctggcctcggaagatatcgcaaccttctcgaccgccgacattgcagccatt
actgtcgcagcgctcgcgggcctctcgaccgacaatgtcgcggcactgtcgaccgaccag
accgcagcattgaagaccactcagatcgctgctctgaagaccgcccagatcggcgcactc
acctcggatcaggtcgtggcgctcacctcgtcccaggtcggagccctgagttcgacgcag
atttcggtgctctccaccgacaatgtcgccgcactctccaccgatcaggtggcggcgctg
aactcgaagacggtcgcagctctgacctcggtccagatcgacgccttgagctccgaccag
gccgaggctctgaccacggcgcaagtggctgcacttggctcgacgcagctcgccgccttg
gcctcggaggatctcgcgaccttctcgaccgccgacattgcggccatcacggtcagtgcg
ctcggcggcctctccaccgacaatctcgcagtcctgtccaccgatcaggctgcggcattg
aagaccacgcaggtcgcggcgctctccaccgcccagatcgccgctctcacctcggaccag
ctcacggcgctcacctcgtcgcaggtcggagctctgacttcgacgcaggtgaaggcgctc
tccaccgacaatgtcgcggcgctctccaccgatcaggtcgcagccttgaactcgaagagc
gtcgcagctctgacctcgacacagatcgaagccctgagctccgaccaggctgaggctctg
accatggcgcaagtggcggcgctgacctcgacgcagattgcggctctggcctcggaggat
atcggaaccttctcgaccgccgacatcgcagcgatcacggtcacggcactggcgggtctc
agcaccgacaacgtcgcggcgctttccaccgatcaggccgcagctctgaagacgacccag
gtcgtggcgctgaagacggcccagatcgccgccctcacctcggaccaggtcgcggcgctc
acctcgtcccaggtcggtgcgctgacctcggcgcagatcacggctctctccaccgacaat
gtcgcggcgctctccaccgaccaagtcgcggcgctgaactcgaagacggtcgcagcgctg
agctcggctcagatcggtgccctgagctccgatcaggcggaggctctgacctcagcccag
atcgccgctctggactcggccgacatcgcggctctggcttccgaggatattgcgacattc
tcgacttcggagattgcggcaatcaccgcgaccgccctgtcgggtcttacgaccgacaat
gtcgcggcactgtcgaccgatcaggcagcagccctgaagaccggccaggtcgcagcgctc
tcgaccgcccagatcgccgcgctcacttcggaccaggtcacggcgctcacctcgtcccag
gtcggggtcctgagctccgcgcagattacggcgctctctaccgacaatgtcgcggcgctc
tccaccgaccaggtcgcggcgctgaattcgaagacggtggcggctctgacttcagcacag
atcgaagcgctgagctccgatcaggctgaagccctgaccacggcacaagtggccgcgctc
gggtcggcgcaactggcagccttggcctccgaggatctggggaccttctcgaccgccgac
attgcggcgatcacggtcaccgcgctgacgggtctttccaccgacaatctcgcggcactg
tccaccgatcaggcatcggcgctgaagaccacccaggtcgcggcgctctccaccgcccag
atcggggcgctcacttcggatcaggtcgcggcgctcacctcggcccagatcggagccctg
acctcgacgcaactggccgcgctcagcacggacaatgtcgcggcgctcaccaccgatcag
gtcgcagccctgagcacgaaggtcatcggcgccttgagctccgaccagatcgacgcgctg
agttccacacaggtcgaagcgctgacttcagcacaggtcgcagcgctcgactcggccgac
attgcggcgctttccacggaggatctcgcgaccttctcgaccgccgatatcgccgcgatc
agcacgactgccctggccggtctgtccacggacgatatcctgagcctctccagcgaccag
ttgctggccgtcacctcaacgcaggtagaagctctggacggctcgcaggtggaggcgatt
atcgcggcataccaggccatctaa
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