Sinorhizobium fredii USDA 257: USDA257_c02780
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Entry
USDA257_c02780 CDS
T02188
Symbol
lsrB
Name
(GenBank) autoinducer 2-binding protein LsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
USDA257_c02780 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c02780 (lsrB)
Transporters [BR:
sfd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
USDA257_c02780 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AFL48876
UniProt:
I3WZ20
LinkDB
All DBs
Position
318146..319135
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AA seq
329 aa
AA seq
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MKILKSLMVTAAVAVALMANAAHAENKKIALVVKALGIGFFEAANKGAQEAAKELGDVEI
IYTGPTSTTAEGQIEVINSLIAQKVDAIAVSANDTDALVPALKKAMDRGIKVISWDSGVA
KEGRLMHLNPSSSPLIGNMIIKLAADNLPEGGDVAVLSASATATNQNTWIAEMKKVQGNY
EGINVVATVYGDDLADKSYRETQGLIQSHPNLKAIIAPTSVGIVAAAQAVTDAGKIGQIN
VTGLGLPSEMAGHVKSGASKSFAIWNPIDLGYSATMIAYDIINGAEAKPGAELKMGRMGT
VKLDDNNEGAMADPFVYDASNVEEFAKIF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcaaatcattgatggtgacggccgccgtcgcggtcgcgctcatggcgaat
gccgcccatgcggagaacaagaagatcgcgctcgtcgtcaaggcgctcggcatcggcttc
ttcgaggctgccaacaagggtgcccaggaagcggccaaggaactcggcgacgtcgagatc
atctataccggcccgacctcgacgaccgccgaaggtcagatcgaggtgatcaactcgctg
atcgcccagaaggtcgatgcgatcgcggtttcggccaacgacaccgatgctctcgtgccg
gcgctgaagaaggcgatggaccgcggcatcaaggtcatttcctgggactcgggtgtcgcc
aaggaaggccggctgatgcacctcaacccgtcgtcgagcccgctgatcggcaacatgatc
atcaagctcgccgccgacaacctgccggaaggcggcgacgtcgccgtgctctcggcctcg
gccaccgcaaccaaccagaacacctggatcgccgagatgaagaaggtccagggcaactac
gagggcatcaatgtcgtggccaccgtctatggtgacgacctggccgacaagtcctaccgt
gagacgcaaggcctcatccagtcccatccgaacctgaaggcgatcattgctccgacctca
gtcggcatcgtcgcggccgctcaggccgtcaccgacgccggcaagatcggccagatcaac
gttaccggtctcggactgccatccgaaatggccggtcatgtgaagtccggcgcctcgaag
tccttcgcgatctggaacccgatcgacctcggctattcggcgacgatgatcgcctatgac
atcatcaacggtgccgaagccaagcccggcgcggagctgaagatgggccgcatgggaacc
gtcaagctcgacgacaataacgaaggcgccatggccgacccgttcgtctatgatgcctcg
aacgttgaggaattcgccaagatcttctga
DBGET
integrated database retrieval system
