KEGG   Sinorhizobium fredii USDA 257: USDA257_c04330
Entry
USDA257_c04330    CDS       T02188                                 
Name
(GenBank) SNF2-like protein
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sfd  Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfd03021]
    USDA257_c04330
Transcription machinery [BR:sfd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     USDA257_c04330
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C RapA_C DEAD ResIII
Other DBs
NCBI-ProteinID: AFL49030
UniProt: I3WZH4
LinkDB
Position
470767..473991
AA seq 1074 aa
MLGYLVQHRLFGCCKVIGFDGRTVDIKFCDGGGRRFFSRSALEGGDFKRAKLHTGALAMG
PHGQCAIDALIDGDGEGPRHYRITYEDGLGATVSEVQLLPLPVRLSDSLPARLLQGRTDP
YATFSARHRLLVALARFNRQVGGLRALLASRIDLHPHQAFVAGTVILDPVRRYILADEVG
LGKTIEAGLIMHDLLSRRPHARILVLTPGPLTRQWLCEMHTSFGGQGFKLADLYPFESVD
LGRWSKVICSTNFALDGLDEDLLAVPWDLVVVDEVHHLLNARHLYDLVMQLSHSTRDLLL
LSAVPVRRRESELYRLLALLDPQTYGKDGTGEEAFLAIYQAQEPLGRRLNLLSHDLTDLE
SGEATSGDVIARLERLLSLPIVQNDEQLHALLAAAEADPERAGALAQEAHQTISDRYRVN
RRILRNRRERLISQDRLAAITRVPALLRYEPDQIEGEAVTAAEAMLAALAADTNLSPDIL
RPFSRILLQALVDPIATLEVLTAVRDAKAATVNSYGREMLNSVVGLGGERWRIQLDTVSA
GVKAHVDPGLLSSAVRLASNWRSSHTSSVRWEALVSLLRGEIAAGRKTLVFAGFPGVAQR
LAALLKNALGEKSVTEFRSDLEDMAKEENVGRFRAEANVSIMVSDESGGEGRNFQFAHSL
IHADLPWQPAVIEQRIGRLDRLGREVISSEVVSHILVSADTWEAGLYACYHDGLDLFGKS
VSGLEFALRHLQDEIIDAALTGGQDGMHDLTARLKAIAAEERVRDDSEALLDEASYHAAR
AERFVRTPSAESELALEAAFLDYFRVLSGGRGVSRHQSADGAEGVWCLRPDNVPYGEITI
IDKDATGETGKRVGTFRRKLAQQQRRVEFFTYGNPLFDAVVESVGQRLTGRTYAIACQAV
GATSFIGLELIIAAQPRLNASDISPSLLNLAEAIFGAQRRQLFVPLLPGQPVEGSRLAGM
LTSLSTKGGGPHWRDLTGDQVQQLVRRFDGDLSTCLNRAMEQLIPAARGVFAKALAEPLA
SERERIAFQRHQLIKGSDAAGAAEAVMLERYSALIDSWDVVIDGIGFLAVNVRC
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgcttggctacctagttcagcatcgcctgtttggctgctgtaaggtcatcggttttgat
ggacgcaccgttgacatcaagttctgcgatggcggcggcaggcgcttcttctcccgtagt
gcgctcgaaggcggtgacttcaagcgggcgaaactccatacgggggcgctggccatgggg
ccgcatggtcagtgcgcgatcgatgccctgatcgatggcgacggggagggaccgcgccat
tatcgcatcacctatgaagacggtctcggtgcgacggtgagtgaggtccaattgctgccg
ctgccggtgcgcctcagtgacagccttcccgcccgtctcctccagggacgaaccgaccct
tatgcgacgttttctgcccggcaccgactgctcgtagcgctcgcgcgtttcaaccggcaa
gtgggcgggttgcgcgctttgctggctagccgcattgaccttcacccgcatcaggcattc
gtcgcgggaaccgtcattctcgatccggtgcggcgctacatccttgccgacgaggtgggc
ctcggtaagaccattgaagctgggctcatcatgcatgatctcctttcacggcgcccccac
gcacgcattctcgtgctcacacccggcccgctgacccgccaatggctgtgtgaaatgcat
accagtttcggtgggcagggattcaagcttgccgatctttatccattcgaatctgtcgat
ttaggtcgctggtccaaagtaatatgctcgaccaattttgcgctcgacggtctcgatgag
gacctgctggcggttccttgggacctggtggtggttgacgaggtccatcatctgctcaac
gcgcgccacctctacgacctggtgatgcagctctcgcacagtacgcgtgaccttctgctg
cttagcgcagttccagttcgtcggcgcgagtccgagctctatcgccttctcgcgctcctc
gatccgcagacctatggcaaagacggcaccggcgaagaagcgttcctcgccatctaccag
gcgcaggaaccgctcgggcgccggctcaacctactatcacacgatctcactgacctagaa
agtggtgaggctacaagcggggatgtgatcgcgcgtcttgagcggctgttgtctctgccg
atcgttcaaaatgacgagcagcttcacgcgctgttggccgccgccgaagccgacccggaa
cgcgctggggcgctcgcgcaagaggcgcatcagacgatctctgatcgttaccgcgtcaat
cgtcgtatccttcgcaatcgccgtgaacgcctgatcagccaggatcgtttggcggcgatt
acccgcgtgccggcgctgctccgctacgagcccgatcagattgaaggcgaggcggtgact
gcggccgaggctatgcttgcggcgctggccgccgacaccaatttgtcgcctgacatcctg
cgtccgtttagccgcatcctcctgcaggcgctggtcgatcctatcgcgacactcgaggta
ttgaccgccgtgcgtgatgcaaaagcggcgacggtcaattcctacggccgcgagatgttg
aattcagtggttggcctgggtggtgagcgctggcgcatccaacttgacaccgtctccgcg
ggtgtaaaggcacatgtcgatcccggcctcctttcatccgccgtccgtctggcgtcaaac
tggcgctcctcgcacacgtcctcggtgcgctgggaagcgctcgtctcgctgttgcgcggc
gagatcgccgccggccggaagacgctggtgtttgcaggcttccctggagtcgcgcaaagg
ctcgctgccctcctcaaaaacgcgttgggcgagaaatccgtgaccgagttccgcagcgat
ctcgaggacatggccaaggaggaaaatgtcggacggttccgtgccgaagccaacgtgtcg
atcatggtcagcgatgaaagcggcggagaaggccgcaactttcagttcgcgcatagtctc
atccacgccgacctcccctggcagccggcggtaatcgagcagcgaatcggccgcctcgac
cgtctcggccgggaggttatctccagcgaggttgtctctcacattttagtcagcgctgac
acatgggaagctggcctttatgcatgctaccatgatggactcgacctgttcgggaagtcg
gttagcggtttagaattcgcgctacggcacctccaggacgagatcatagatgcggcgctc
accggtggtcaggacgggatgcatgacctcacggcccggctaaaagcgatcgctgcagaa
gaacgcgttcgagacgacagcgaagcgctactcgacgaagcctcgtatcacgctgcacgt
gccgaacgtttcgtccgcacgccgtcggctgaaagtgaactcgcgcttgaggctgccttt
ctcgactactttcgggtactgtcgggcggcaggggcgtgtcaaggcaccagagcgccgat
ggagccgaaggcgtatggtgtttgcgacccgataacgtcccatacggggaaattactatc
attgacaaggacgcgacgggcgaaaccggcaagcgcgtcggcaccttccggcgcaagctc
gcacaacagcagcgccgcgtcgaatttttcacctacggtaatccgctcttcgatgcagta
gtcgaatcagtaggccagcgcctgaccgggaggacctatgcgatcgcctgtcaggccgtg
ggcgcaactagctttatcgggcttgagctgatcatcgccgcccaaccccgcctcaacgcg
agcgacatctcaccaagtctcctgaacctcgcggaagcgatcttcggggcacagcggcgg
cagttgttcgtgccactgctcccaggccaaccagttgaaggatcgcggctggcaggcatg
ctgacttcattgtcgacgaagggtggagggccgcactggcgcgatctaactggagatcag
gtccagcagttggtccgacgtttcgacggcgatctgtcgacctgcctaaatcgcgcaatg
gagcagctgatccccgccgcacgcggggttttcgccaaggccttggccgagccgctggcc
tccgaacgcgaacgcatcgccttccaacgacaccagttgatcaagggttcagatgccgcc
ggcgcggccgaagcggttatgctagagcgctattccgcgcttatcgacagctgggatgtt
gtcatcgacgggatcggctttctcgccgtcaacgtgcggtgctga

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