Sinorhizobium fredii USDA 257: USDA257_c04840
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Entry
USDA257_c04840 CDS
T02188
Name
(GenBank) hypothetical protein
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfd03009
]
USDA257_c04840
Enzymes [BR:
sfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
USDA257_c04840
Ribosome biogenesis [BR:
sfd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
USDA257_c04840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AFL49080
LinkDB
All DBs
Position
complement(528210..528947)
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AA seq
245 aa
AA seq
DB search
MRANFRMQRLFVGSPLHTGARHEATKEQFNYLVNVLRLDESSSILLFNGRDGEWRAELSL
PSRKHLVLTATEQTRPQPAPSDLAYLFAPLKVGRLDYLVQKAVEMGAGVLQPVMTQHVQG
KLGNLDRLRANVIEAAEQCGVLGIPEVETPRKLEELLANWPRDRRIIFCDESNESQNPLP
ILGGISERRLALLIGPEGGFSEAERVLLRSLDFVTAIPLGPRILRADTAAVAALALIQAT
LGDWK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaattttcgcatgcagcgactgttcgtcggaagcccgcttcacacgggagca
aggcacgaggccaccaaggagcagttcaactatctcgtcaacgtactgcgcctcgacgag
agctcgtcgatcctgctcttcaacggacgagacggcgagtggcgtgcggaattgtccctg
ccgtcccgaaagcacctggttctcaccgcaaccgagcagacgcgtccgcagcccgccccc
tcagacctcgcctatctgtttgctccgctcaaggtgggccggctcgactaccttgttcag
aaggctgtcgagatgggcgccggggtgctgcagccggtgatgacccagcatgtgcagggc
aagctcggcaatctcgaccggcttcgcgccaatgtcatcgaggccgcggagcaatgcggg
gttctcggcattcccgaggtggagacgccgcgaaagctcgaagagctcctggcgaactgg
ccgcgcgatcggcgcatcatcttctgcgacgagagcaacgagagccagaacccgctgccg
atcttgggcgggatcagcgagcgtcggctcgccctgctgatcggcccggagggcggtttc
tcggaagcagagcgggtgctcttgcgcagcctcgatttcgtcaccgccatcccgcttgga
ccgcgaatcctgcgcgccgatacggcggcggtggccgcgctggcgctcatccaggcaacg
cttggcgactggaaatga
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