Sinorhizobium fredii USDA 257: USDA257_c05920
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Entry
USDA257_c05920 CDS
T02188
Name
(GenBank) putative RNA methyltransferase R00878
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfd03009
]
USDA257_c05920
Enzymes [BR:
sfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
USDA257_c05920
Ribosome biogenesis [BR:
sfd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
USDA257_c05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_31
TRAM
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AFL49187
UniProt:
I3WZY1
LinkDB
All DBs
Position
complement(646758..648005)
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AA seq
415 aa
AA seq
DB search
MSTGIVTINRLGAQGDGIAQTEEGPVFAPFTLPGETVALAVNKTHGTLISLKQASPERVE
PKCRHFGPDGVNGTCGGCTLQHASDALYHAFKRNLVIDALKSKGLAPAVAPLVIARPGER
RRAVFTARQTEKELLLGFNQAQSHHIVAIGECPITSPGIVSRLATIRKIAAAMVSSAEPF
RITVLETDTGLDLAFEDIKLNDRQRRSTVEAVLGERGIARVSLNGEIIIEPVKPLIDFGG
VSVSPPPGAFTQATRPAEEAMARLVLDHIGKAKRVADLFAGVGTFALRIARSARVHAVEG
EDKAVKALDFAARNTQGLKPVTVEKRDLFRRPMMAQELKVFDAVVFDPPRAGAEVQCHEL
ARSGVKKVAAVSCNPTTLARDLSILVIAGYRITSVTPIDQFLWSAHVEAVATLEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgggatcgtcaccatcaaccgtctcggcgcgcagggcgacggcatcgcccag
accgaggaaggcccggtctttgcaccgttcaccctgcccggcgagaccgttgcgcttgcc
gttaacaagacgcatggcacgctgatttcgctgaagcaggcctcgccggagcgcgtcgaa
ccgaaatgccgtcacttcggtcccgatggcgtcaacggcacctgcggcggctgcaccctg
cagcatgcctccgacgcgctctatcatgccttcaagcgcaatctcgtcatcgacgccttg
aagtcgaaggggcttgccccggcggtggcgccgctcgtcatagcgcggcccggcgagcgg
cggcgcgccgtgttcacggcccggcagacggaaaaggaactgctgctcggcttcaaccag
gcgcaaagccaccatatcgtcgcgatcggcgaatgtcccatcacgagcccgggcatcgtc
tcgcggctcgcgacaatccgcaaaattgcggcagcgatggtgtcgagcgccgaaccgttc
cggatcaccgtgctcgagaccgacacgggactcgacctcgccttcgaagacatcaagctc
aacgaccggcagcggcgttcgaccgtcgaggccgttctcggcgagcgcggcattgcccgc
gtcagcctgaacggggagatcatcatcgagccggtcaagccgctaatcgatttcggcggc
gtgtcagtctcgccgccgcccggtgccttcacacaggcgacgcggccggccgaggaggcg
atggcgcgactcgtcctcgaccacatcggcaaggcgaagcgcgtggccgatcttttcgcc
ggcgtcggcacctttgcactccggatcgcccgatcggcgcgcgtgcacgccgtggagggc
gaggacaaggcggtgaaggcgctcgacttcgcggcccgcaatacgcaaggcctgaagccg
gtaacggtcgagaagcgcgaccttttccgtcggccgatgatggcgcaggagctgaaagtc
ttcgacgcggttgtcttcgatccgccgcgggccggcgccgaggtccaatgccacgagctc
gcccgatccggcgtgaagaaggttgccgcggtctcctgcaacccgaccacactcgcgagg
gatctctcgatcctggttatcgccggctaccgcatcacatcggttacgccgatcgaccag
ttcctctggtcggcgcatgtcgaggcggttgcgacgctcgaaaaatga
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