Sinorhizobium fredii USDA 257: USDA257_c07640
Help
Entry
USDA257_c07640 CDS
T02188
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
USDA257_c07640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c07640
Enzymes [BR:
sfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
USDA257_c07640
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
USDA257_c07640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
AFL49357
UniProt:
I3X0F1
LinkDB
All DBs
Position
complement(807433..808317)
Genome browser
AA seq
294 aa
AA seq
DB search
MISANDLSPSELAALLAFHAEAGVEWLLEDKPVDRLAEFEAMRAKRADARAAPQVRPPSP
SEVQSGRVQPAPPGKARDPLPAAPASVPPAVAIPDEQAISEARFAAESARSLAELRTAME
AFTGCNLRNSARNLVFADGNTASGVMIVGPMPYAEDDRDGQPFAGKHGDMLERMLFGIGL
SRSDVLLANVVPWRPPGNRVPSGREADICRPFIERQIALAEPRHLLLLGNFTARFFFGTN
ETIHQTRGQWRELSAGGHPVQGLATLHPQDLISAPVNKRFAWQDLLAFRARITG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggccaacgacctctccccttcggaactcgccgcccttcttgctttccatgcg
gaggcgggcgtcgaatggttgcttgaggacaagcccgtcgatcggctggcagagttcgag
gcgatgagggccaaacgcgccgacgcgcgggctgccccgcaagtcaggccgccgagcccc
tcggaggtgcagagcggtcgtgtccagccggcgccccccggcaaggcccgggaccctctt
cctgccgcgccggcaagtgttccgccggcggtggcgatcccggacgagcaagcgatcagc
gaagcacgattcgctgccgaaagcgcgcgctcgctcgccgaattgcgcacggccatggag
gcctttaccggctgcaacctgaggaacagcgcccgcaacctcgtattcgccgacggcaac
accgcctccggcgtcatgattgtcggtccgatgccctatgcggaggatgaccgggatggc
cagcccttcgccggcaagcacggtgatatgctggaacggatgcttttcggcatcggcctg
tcgaggtcggatgtgctgctcgccaatgtcgtaccctggcggccgcccggaaaccgcgtg
ccaagcggacgggaggccgacatctgccgtcccttcatcgagcggcagattgccctcgcc
gagcccaggcacctgctcctactcggcaatttcaccgcccgcttcttcttcggcaccaac
gagacgatccatcagacgagggggcaatggcgcgagctttccgccggaggccaccccgtt
caggggttggcgacgttgcacccccaggatctcatcagcgcgccggtcaacaagcgtttc
gcctggcaagatctcctcgccttcagggcccggatcaccggctga
DBGET
integrated database retrieval system
