Sinorhizobium fredii USDA 257: USDA257_c08350
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Entry
USDA257_c08350 CDS
T02188
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase CysS
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c08350 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c08350 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c08350 (cysS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
USDA257_c08350 (cysS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class I (G)
USDA257_c08350 (cysS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c08350 (cysS)
Prokaryotic type
USDA257_c08350 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
tRNA-synt_1f
CysS_C
tRNA-synt_1c
AcrIC5
Motif
Other DBs
NCBI-ProteinID:
AFL49427
UniProt:
I3X0M1
LinkDB
All DBs
Position
877120..878520
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AA seq
466 aa
AA seq
DB search
MGGVPTLKLYNTLTREKADFRPIDPDNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLR
HVFGESHVTYARNITDVDDKINARALRDYPGLPLNEAIRRVTEKTETQFLDDAAVLGCLD
PTVQPRATESIPEMVEIIEKLIARGHAYESEGEVLFDTRSMADYGQLSKRNLDEQQAGAR
VAVEAHKKNPGDFVLWKLSQEHEPGWDSPWGRGRPGWHIECSAMSGRYLGEVFDIHGGGL
DLIFPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLHTEKFG
RRKWPGEVLRLAMLMTHYREPIDFSIKRLEEAEHLLSRWPVPGEATGEPDAAIVAALADD
LNTVAAIQALHALAQKASVDAQYLGAFAASAALIGVLPKEIELDEAVVQEIDGRVRARLE
LLKARNYAEADSIRADLLDRGIQLKDGKDPETGERVTTWEVKRSQT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagtgccgactttgaagctgtacaacacgctgacgcgggaaaaggccgatttc
cggccgatcgaccctgacaacgtccgcatgtatgtctgcggcccgaccgtctacgactat
gcccatatcggcaacgcccggccaatcatcgtcttcgacgtgcttttccggctgcttcgc
catgtcttcggcgaaagccatgtcacctatgcgcgcaacatcacggacgtcgacgacaag
atcaatgcgcgagcgctgcgcgactaccccggcctgccgctgaacgaggcgatccgccgc
gtcaccgagaagaccgagacgcagttcctcgacgatgccgcggtgctcggctgcctggat
ccgacggtacagccgcgcgccaccgagagcatccccgagatggtcgagatcatcgagaag
ctcatagccaggggccatgcctatgaatccgagggcgaagtgctcttcgacacgaggtcg
atggcggactacggtcagctctcgaaacgcaatctggacgagcagcaggccggtgcgcga
gtcgcggtcgaggcgcataagaagaatcccggcgatttcgtgctttggaagctttcgcag
gagcatgagcccggctgggacagtccatggggacgcggccggcccggctggcatatcgaa
tgctcggcgatgagcggccgctatctcggcgaagtcttcgacatccatggcggcgggctc
gacctgatcttcccgcatcacgagaacgagatcgcccagtcgcgctgcgcgcacggcacg
gatgtcatggcgaatgtctggatgcacaacggcttcctgcaggtcgaaggccgcaagatg
tcgaagtcggaaggcaatttcgtcaccatctacgagctcctgcacacggagaagttcggt
cgccgcaaatggccgggcgaggtgctgaggctggcgatgctgatgacgcattatcgcgag
ccgatcgatttttcgatcaagcggctggaggaagccgagcacttgctctccagatggccg
gtgcccggcgaggcgacgggcgagccggacgccgccatcgtggctgcgcttgcggacgat
ctcaacaccgtcgcggcgatccaggcactgcacgccttggcgcagaaggcgtcggtggat
gcgcagtatctcggcgccttcgccgcaagcgccgcgctgatcggcgtgctgccgaaggag
atcgaactcgacgaagcggtcgtccaggagatcgatggtcgcgtgcgtgcccgcctcgaa
ctcctgaaagcgaggaactatgccgaagccgacagcatccgcgccgatctcctggaccgg
ggcatccagctcaaggacggcaaggatccggaaacaggcgaacgggtcaccacctgggaa
gtgaaacggtcacagacctga
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