Sinorhizobium fredii USDA 257: USDA257_c08970
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Entry
USDA257_c08970 CDS
T02188
Name
(GenBank) putative ribonuclease T2 family protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c08970
Enzymes [BR:
sfd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
USDA257_c08970
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
USDA257_c08970
Prokaryotic type
USDA257_c08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
AFL49489
UniProt:
I3X0T3
LinkDB
All DBs
Position
complement(938977..939693)
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AA seq
238 aa
AA seq
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MLVAALIAPTRLLPAFLALSAIAGCSNEGDKNPGPGTEAAKSEASASVPIGKGFDFYVLS
LSWSPTWCRANDPRKESEQCERGSGLIVHGLWPQNERGYPQFCATRQSDRVPESLGRQYL
DIVPSMGLIGHQWRKHGSCSGLTQADYFAVTRAARERLALPAELASTGQTRDLSVASIET
AFAVKNPGMTREMIAVTCEGRLIEEIRICFDKELRFRACPEIDRRACRRDAVLLPAAP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgtcgctgcgttgattgcgccaacaaggctgctgccggcgtttctcgctttgtcg
gcgatcgccggctgcagcaatgaaggcgacaaaaaccccggcccaggcacggaggccgcg
aaaagcgaggcatcggcaagcgttcctatcggcaagggcttcgacttctatgttctatcc
ctgtcctggtcaccgacctggtgtcgcgccaatgacccgaggaaagaatcggaacaatgc
gagcgtggcagcggtctgatcgtccacggcctatggccgcagaacgaacgcggctatccg
caattttgcgcgacaagacaatcggatcgcgtgcccgaatcgctcggccggcaatatctc
gacatcgttccgtcgatgggcttgatcggccatcaatggcgcaagcacggaagttgttcc
ggcctcacccaagccgactattttgccgtcacgcgggcggcccgcgagcggcttgccctc
cccgccgaactcgcttccacaggtcaaacgcgtgacctctccgtcgcgtcaatcgagacg
gctttcgcagtgaagaatcctgggatgacgagagagatgatcgctgttacctgcgagggc
cggctgatcgaggaaatcagaatctgcttcgacaaggaattgcgtttcagggcctgccct
gaaatagatcgccgcgcctgcagacgggacgcggttctactccccgccgcaccatga
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