Sinorhizobium fredii USDA 257: USDA257_c09140
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Entry
USDA257_c09140 CDS
T02188
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c09140 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c09140 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c09140 (aspS)
03029 Mitochondrial biogenesis [BR:
sfd03029
]
USDA257_c09140 (aspS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
USDA257_c09140 (aspS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
USDA257_c09140 (aspS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
USDA257_c09140 (aspS)
Prokaryotic type
Other AARSs
USDA257_c09140 (aspS)
Mitochondrial biogenesis [BR:
sfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
USDA257_c09140 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AFL49506
UniProt:
I3X0V0
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All DBs
Position
959439..961226
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AA seq
595 aa
AA seq
DB search
MHRYRSHTCAALRKSDVGSTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK
MAETVRGEWVIRIDGSVKARTEDTINKNMPTGEIELYAREIEVLSAAKELPLPVFGEPDY
PEDVRLKYRFLDLRRETLHKNIVRRTEVIAAMRRGMTEIGFTEYTTPILTASSPEGARDF
LVPSRIHPGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVEQEDVWDTMEPMIRAIFSDFAGGKPVTEKFQRIPYDTAIRKYGSDKPDLRNPIEMQ
EVTQHFAGSGFKVFANMIASNPKVEIWAIPAKTGGSRAFCDRMNAWAQSQGQPGLGYIFW
RKEGEKLEGAGPLAKNIGEERTDAIRTQLGLEDGDACFFVAGEPAKFYKFAGEARTRAGE
ELNLVDRDRFELCWIVDFPFYEWNEDEKRVDFAHNPFSMPQGGLQGLSGDDLLSIKAFQY
DMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEEQFGGLYRAFQYGAPPHGGMAFG
IDRIVMLLVGAKNLREISLFPMNQQAVDLLMGAPSPATPAQLRELAIRPIPQKKD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttaccgcagccacacctgtgccgccctccgaaagtcggacgtcggctccacc
gttcgcctttccggctgggttcaccgcgtccgcgaccatggcggcgtgctctttatcgac
ctgcgcgaccattacggcattacccaggtcgtcgccgatccggattcgccggccttcaag
atggctgaaaccgtgcgcggtgaatgggtcattcgcatcgacggaagcgtcaaggctcgc
accgaggacacgatcaacaagaacatgccgaccggcgagatcgagctctatgcccgcgag
atcgaagtgctgtcggccgccaaggagctgccgctgccggtcttcggcgagccggattat
ccggaagatgtgcgcctcaagtatcgcttcctcgatctccgccgcgagaccttgcacaag
aacatcgtcaggcgcaccgaggtcatcgccgccatgcgccgcggcatgaccgagatcggc
ttcaccgaatatacgacaccgatcctgacggcttcgtcgccggaaggcgcgcgcgacttc
ctcgtgccgagccgcattcatcccgggaccttctacgcgctgccgcaggcgccgcagcaa
tacaagcagctgctgatggtggccggcttcgaccgctatttccagatcgccccgtgcttc
cgcgacgaggacccgcgcgccgaccggctgcctggcgagttctaccagctcgacctcgaa
atgagcttcgtcgagcaggaagacgtatgggacacgatggagccgatgatccgcgcgatc
ttttcggatttcgccggcggcaagccggtcaccgaaaagttccagcgcatcccgtatgac
acggccatccgcaagtatggttccgacaagccggacctccgcaacccgatcgagatgcag
gaggtcacccagcatttcgccggctccggctttaaggtcttcgccaacatgatcgcctcg
aacccgaaggtggagatctgggcgattccggccaagaccggcggctccagggcattctgc
gaccgcatgaacgcctgggcccagagccaggggcagcccggcctcggctatatcttctgg
cgcaaggaaggcgagaagctcgaaggtgcaggcccgcttgccaagaacatcggcgaggag
cgcaccgatgcgatccgtacgcagcttggccttgaggatggcgatgcctgcttcttcgtc
gccggtgagccggccaaattctacaagttcgccggcgaggcccgcaccagggccggcgag
gaactgaacctcgtcgatcgcgaccgcttcgaactgtgctggatcgtcgacttcccgttt
tatgaatggaacgaggacgagaagcgcgtcgacttcgcccacaaccctttctcgatgccg
cagggcgggctgcaagggttgtcgggcgatgatctgctgtcgatcaaggcgttccagtac
gacatggtctgcaacggctttgagatcgcatccggctcgatccgtaaccagtcgccggaa
ctgatggtcaaggcattcgagaatgtcgggctcagccaggcggacgtcgaagagcagttt
ggtggtctctaccgcgccttccaatacggtgccccgccgcatggcggcatggccttcggt
atcgaccgtatcgtcatgctgctcgtcggcgccaagaacctgcgcgagatctcgctgttc
ccgatgaaccagcaagccgtcgatctgctgatgggcgcgccatcgccggcaacgccggcg
caactgcgcgagctggcgatccgtccgataccgcagaagaaggactga
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