Sinorhizobium fredii USDA 257: USDA257_c10240
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Entry
USDA257_c10240 CDS
T02188
Symbol
csd1
Name
(GenBank) putative cysteine desulfurase Csd
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00450
Selenocompound metabolism
sfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
USDA257_c10240 (csd1)
Enzymes [BR:
sfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
USDA257_c10240 (csd1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
USDA257_c10240 (csd1)
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GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFL49615
UniProt:
I3X159
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Position
complement(1073234..1074424)
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AA seq
396 aa
AA seq
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MSDALDVEQLRSETPGCAAGVHFNHSGASLPSQAVLGAVWDYLRKEATEGPMEAANRAST
LLEEVRADTAALIGARPSEIAFLSSGSIAWGAAFSALPPLGAGDRILVGRQEWGGNLATM
QDAAARAGARVEIIPVRDDGGIDAGALASMIDKRVRLVSLTWLPANGGLINDAAAVGRVT
QAAGIPYFIDAGQALGQIPIDVAFLGCDVLKAAGRKFLRGPRGTAILYVRQEFLPRLTPR
YLDVLSGPIVDGAAKIRNDARCFEAGEIAPALIFGLGTAVRQARTLGIAAIRDRIGPLAN
ELRANLRSIPNVTVRDLGAELSGIVSFTVEGIAATEVRAALAERQIAIGANGVPYTPLDM
VARGLDQIARASVSYLNTVPEIARLSEAVANIARSA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcactggacgtggagcagcttcgttcggagacgcctggctgcgcggctggc
gtgcatttcaatcactccggcgcctcgctgccctcgcaagcggtactcggggcggtctgg
gactacctgcgcaaggaagcgaccgagggcccgatggaggcggcgaacagggcgagcacg
cttcttgaggaggtccgagccgatacagcggcactgatcggcgccaggccgagcgagatt
gcattccttagcagcggatcgatcgcctggggcgcggctttttcggccctgccgcccctt
ggcgcaggcgaccgcatcttggtcgggcgccaggaatggggcggcaatctcgccacgatg
caggacgccgcagcgcgagccggagcgcgtgtcgaaatcattcccgtccgcgacgacggg
ggcatcgacgccggcgctctcgcgtcgatgatcgataagcgcgtgcggctcgtgtcgctc
acatggctgccggcgaatggtggcttgatcaatgacgcggcggcggtgggacgcgtgacc
caggcggccggcattccctatttcatcgatgcgggccaggccctcggccagatcccgatc
gacgtcgccttcctcggttgtgacgtgttgaaggcagcgggccggaaattcctccgggga
ccgcgcggcacggcgatcctttatgtcaggcaggaattcctgccacggctgacaccgcgc
tatctcgatgtgctttcgggtccgatcgtcgacggggctgccaagatccgcaacgacgcg
cggtgcttcgaagccggcgagattgcgccagcgctgattttcgggctgggcactgcggtt
cgccaggcaaggacactcggaatcgcggcgatccgcgacaggatcggcccgctcgcgaat
gagctgcgcgccaatctgcgcagcatacccaatgtgacggtacgggacctcggagccgaa
ctctccggtatcgtctcattcaccgtcgagggcattgcggcaacggaagtccgcgcagcc
ttggccgaaaggcaaatcgcgatcggcgcgaatggtgttccgtatacgccgctcgatatg
gtcgcgcgagggctcgaccagatcgccagggcttcggtaagctatctcaacaccgtgccg
gagattgcccgtctatcggaagcggtagcgaatatcgcacggtcagcatga
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