Sinorhizobium fredii USDA 257: USDA257_c12700
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Entry
USDA257_c12700 CDS
T02188
Symbol
appF1
Name
(GenBank) oligopeptide transport ATP-binding protein AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
USDA257_c12700 (appF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c12700 (appF1)
Transporters [BR:
sfd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
USDA257_c12700 (appF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
AAA_16
AIG1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFL49861
UniProt:
I3X1V5
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All DBs
Position
1341530..1342513
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AA seq
327 aa
AA seq
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MGAQPLLKIENLVKHFHVRLGAFGERSATVHALDDISLDILEGETLSLVGESGCGKSTTG
FTILNLHRATSGKVLYKGQDLTALDEKRMRPFRRDLQIVFQDPYSTLNPRMTVGEAIGEP
ILFHKLATKAELEKKVAALLTDVGLPPRFASRYPHELSGGQRQRVVIARALACQPKFIVC
DEAISALDVSIQAQIINLLLDLQEKYGLTYLFIAHDLAVVRHISTRVGVMYLGRLAELAS
RDELFETPLHPYTKALLSAVPETDPEHERSRKRQILEGDVPSPLAPPLGCRFHTRCPIAM
EVCSRVVPKWKEARPGHLVACHAVNGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctcagccacttctgaagatcgaaaacctggtgaagcacttccacgtccggctc
ggcgccttcggtgaacggtcggcgaccgtgcacgccctcgacgacatcagcctcgatatt
ctcgagggcgagaccttgagcctcgtcggcgaatccggctgtggcaagtccaccaccggc
ttcaccatcctcaacctgcaccgggcgacgtccggcaaggttctctacaagggccaggac
ctgaccgcactcgacgagaagcggatgcggccattccggcgcgatctgcagatcgtcttc
caggatccctattcgacgctcaatccgcgcatgacggtcggcgaagcgatcggcgagccg
atcctcttccacaaactcgcgaccaaggccgaactcgagaaaaaggtcgcggcactgctc
accgatgtcggcctgccgccgcgctttgcctcgcgctatccgcacgagctttccggcggt
cagcgccagcgcgtggtgatcgcccgggcgctagcctgccagccgaaattcatcgtctgc
gacgaggcgatctcggcccttgatgtgtcgatccaggcccagatcatcaacctgctcctc
gatctgcaggagaaatacgggctcacctacctattcatcgcccacgacctggctgtcgtg
cggcacatctcgacacgcgtcggcgtcatgtatctcgggcgcttagcagagcttgccagc
cgcgacgagctcttcgagacgcctctccacccctatacgaaggcgctgctttcggccgtg
ccggagaccgatccggagcatgagcgcagccgcaagcggcagatcctcgaaggcgacgtg
ccgagcccgctcgcgccgcccttgggttgtcgcttccatacgcgttgcccgatcgccatg
gaggtctgcagccgggtggttccgaagtggaaggaggcgcgtccggggcatctcgtcgcc
tgccacgccgtgaacggcgaatag
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