Sinorhizobium fredii USDA 257: USDA257_c12900
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Entry
USDA257_c12900 CDS
T02188
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
Organism
sfd
Sinorhizobium fredii USDA 257
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
HTH_IclR
MarR
HTH_24
MarR_2
GntR
HTH_AsnC-type
SpoIIID
HTH_PafC
HTH_7
HTH_Tnp_4
HTH_5
HTH_Crp_2
DUF4423
LacI
TrmB
FeoC
Fe_dep_repress
HTH_28
HTH_10
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFL49881
UniProt:
I3X1X5
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Position
complement(1362112..1362897)
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AA seq
261 aa
AA seq
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MKLEARRQAIMDVLMEAGTASVEDLAIRFGVSKMTVHRDLDDLEQGGLLRKVHGGASIQS
SSQFESDFRYREKIATAEKRRIAEHAATLIEPGQSVIIDDSSTAGAIAACLKDIRPLTVI
TNNLGVIAELSGAPGISLIALGGQYSKKFNGFFGIVTEEALRSLRADVAFLSSSAIEGAT
AFHQDQEVVQTKRQMVKSATRKYLLVDHGKFGRSARHFLTGLDVFDVVLTGSEVSEGDAA
ALGDAGVKLITVSNRKMVEEA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactggaagccaggcgacaggcgatcatggacgttttgatggaggcgggaacggcc
tccgtcgaagacctcgccattcgttttggcgtcagcaagatgacggtgcatcgcgatctc
gacgatctcgagcagggcggcttgttgcgcaaggtccatggcggtgcgtcgatccagtcg
agctcgcagttcgaaagcgatttccgctatcgcgagaagatcgccacggccgagaagcgg
cgtattgccgagcatgcggcgacgctgatcgaacccggccagagcgtcatcatcgacgat
agttccaccgccggtgcgattgccgcttgtctcaaggacatccgcccgctcaccgtcatc
accaacaatctcggcgtcattgccgaactatcgggcgccccgggcatcagcctgatcgcg
ctcggtggccagtacagcaagaaattcaacggcttctttggaatcgtcaccgaggaggcg
ctgcgctcgctgcgcgccgacgtcgccttcctgtcgagctccgcaatcgaaggcgcgacc
gccttccaccaggaccaggaggtcgtgcagaccaagcggcagatggtgaaatcggcgacg
cgcaaatacctgctcgtcgatcacggcaagttcgggcgctcggcccggcatttcctgacc
gggctcgacgtcttcgatgtggtgctgaccggcagcgaggtctcggaaggcgacgctgca
gcgctcggcgatgccggtgtcaagctcatcacagtcagcaatcggaaaatggtggaagag
gcatga
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