Sinorhizobium fredii USDA 257: USDA257_c15120
Help
Entry
USDA257_c15120 CDS
T02188
Symbol
iclR1
Name
(GenBank) acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c15120 (iclR1)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
USDA257_c15120 (iclR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
HTH_24
HTH_20
HTH_Crp_2
Dimerisation
TrmB
HVO_A0114
HTH_9
HTH_26
HTH_PafC
MarR
HTH_7
HTH_5
DUF7346
HTH_Tnp_ISL3
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AFL50102
UniProt:
I3X2J6
LinkDB
All DBs
Position
1600704..1601534
Genome browser
AA seq
276 aa
AA seq
DB search
MAVVSEQTKGKRGRKAGANSTPSSVQVLDRSLALFSLVADRDGSTLTDLADETGLAPSTI
HRLLTSLSSHGMVAHDPDTGEWTIGVRAFEIGNAFLRFRKLGTISRPFLKRLMDETGETA
NIGIEDDGDVVFISQVESHAPMRAFFRPGRRGPSHASGIGKAILSTWSDTEIAKTLGGKT
LTHFTDRTIDTLPGLIRNIQDIRNRGWSIDDEEHTLGMRCIAAPLFNEYGEAIGGISISG
PSVRIDDNRLEALGSLVRRTADELTRAIGGHRPGES
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtggtttcggagcaaacaaaaggcaagcggggccggaaggcgggcgccaattcg
actccgtcctccgttcaagtgctcgaccgcagcctggcgctcttcagcctcgtggcagat
cgcgacggttcgacattgaccgacctggccgatgagacggggctcgcgccatcgacgatc
caccgcctgctgacctcgctttcgagccacggcatggtcgcgcatgatccagatacaggc
gagtggacgattggcgtgagggccttcgagatcggcaacgcctttctgcggttccgcaag
ctcggcacgatcagccggcctttcctgaagcgtttgatggacgaaaccggcgaaacggcc
aatatcggcatcgaggacgatggcgacgtcgtgtttatctcgcaggtcgaaagccatgcg
ccgatgcgtgccttcttccgccccggacggcgcggaccgagccacgcctccggtatcggc
aaggcgatcctttccacttggtcggatacggaaatcgccaagacgctcggcggcaagacg
ctgacgcatttcaccgaccggacgatcgatacgttgccggggctgatcaggaacatccag
gatatccgcaatcgcggctggtcgatcgacgacgaggaacacacgctcggcatgcgctgc
atcgccgctccgctgttcaacgaatatggcgaggcgatcggcggcatctcgatctccggg
ccgtcggtccgcatcgacgacaacaggctcgaagcactcggctcgctcgtgcgccggacg
gctgacgagctgacccgcgccatcggcggccaccggccgggagagagctga
DBGET
integrated database retrieval system
