Sinorhizobium fredii USDA 257: USDA257_c15850
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Entry
USDA257_c15850 CDS
T02188
Name
(GenBank) putative exported protein, TonB-dependent receptor protein
Organism
sfd
Sinorhizobium fredii USDA 257
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
TPR_19
TPR_17
TPR_2
TPR_16
TPR_14
TPR_11
TPR_1
TPR_8
TPR_9
YfiO
Motif
Other DBs
NCBI-ProteinID:
AFL50175
UniProt:
I3X2R9
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Position
1680037..1683672
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AA seq
1211 aa
AA seq
DB search
MRRRVTGALLGVMACFAPFSAFGEPVPRPDPVAGSVIARKSGEEVRFVDVSNWRSVDIAQ
DLLPGDLLRTNATGSLAVLFRDRTQIRLGRNTALRVKQIGTGETNLELESGTIWARAERG
GQGLVIDTPAAAAAIRGTDWTLTVGADGKTSLTVLEGVIELSNAHGSVTVMQGEGAVAAI
GSAPTKIVIVTPKDREQMLFHLALRDAFVLMPATTLRAPDMRRQRERIEAQPEVSRSAED
WLTLAEIYLSLNGRQKAQAALDAARRRGLDRSQSARAGLVDALTAGSQGRYADAAKLFDQ
SARGLDAKRRSIAAYGGYFARALANPDRVENPPRQAVGAYGAFAKAFTEGFRTDVRAAVE
TLRKAELQYPDDPTLPAVRAQFAMLIDDRDEVRDGIEKALKIDADDPYALEARAKYRFNI
ENDRDGALADLERGLKAAPGDPSIWNWLGAVQDERGDTRAAEYAVKKAIELDPQDPSYHA
NLALMYLGELRLAEAKREIDAALAIDPSFDLVLIARGRYHLQNGDVEKAIQDLLAGSTAN
PAYSNAQLLLAAAHYEKGDRIPADQALDNADRLDPNDPIVSQVRTIVSIDDYDADAAIRY
AQETMRRTRAKGGDTAAIGANQQAGSALNNAFRLQGLDAWGQYYGDAVFDPFSSASYLDQ
AIRGSVNPLFNGYSFSVSPITNAQNPSTFAALFQGLLLDPHLLAYRARATDLYRTPFFEI
DLGGGPTLEDGNTGWIGEAEIRGFAYSPFPVSVFGNFQWEEPRDTIDLGGGLEMDRETRL
IGGTGYVTATPTPDDRVVAFLNMAEVDDSRNIFDIPHPMLVPFNGDSLNGNNGSNLNSGV
AWSHTFGYQNIANAAFFFNDTETVETSRLLFSDIPFPDIEYLRREQRQTTYIGALNHLYG
DGDLTWRYGLEAGAVTQKEKTEYCNLLPPAIPLSSATSSATAGVMKAYVDGLYEVTPDLK
VEGALFARYIEHVNDNNVRLEPKLGIAWAPAEGHWLRAAVQREGYNLDVATLAPVGIVGL
QPNQFLIGAGGYADTFAFRWDAEWNDRLFTALDYQHQEIRDGSIDFPLSTNDYDFRKARV
DRVALTANLALSHGFGLSATAAHTRSKDFSPANPAGELPLLPENAGQVALTWVNEANIRT
MIAANYVGTRSQGSTRLDDFWTLDASLLWEPFDKRFEVELAGFNLLDEEFELRDGLPGWG
PTVKGTVKVRF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaagagtaacgggggcattgctcggcgtgatggcgtgctttgcgccattttcg
gcgttcggcgagccggttccgcgccccgaccccgttgccggttcggtcattgcgcgaaaa
tccggcgaagaagtgcgcttcgtcgatgtctccaattggcgctccgtcgacattgcgcag
gatctcctccccggcgacctgctgcgcaccaacgccaccggctcgctcgccgtgcttttt
cgcgatcgcacacagattcgcctcgggcgcaatacggcgcttcgcgtcaagcagatcggc
acgggcgagaccaatctcgaactggaatcaggcacgatctgggcccgggccgagcgcgga
gggcagggcttggtgatcgatacgccggcggccgccgccgccatccgcggcacggactgg
acgctgaccgtcggcgccgacgggaagacctcgctgacggtactcgaaggcgtcatagag
cttagcaatgcccatggcagcgtgacggtaatgcagggggaaggcgccgtcgccgcgata
ggcagcgcgccgaccaagatcgtcatcgtgacgcccaaggaccgcgaacagatgctgttc
catcttgcgctccgcgacgccttcgttctgatgcccgccacaactctccgcgctccagac
atgcggcgccaaagggagcggatcgaggcgcaaccagaagtctcacgctcggccgaagac
tggctgacgcttgccgagatttacctgtcgctcaacggccggcaaaaagcacaagccgca
cttgacgcggcgaggcggcgaggcctcgatcgctcccagagcgctcgagccgggcttgtc
gatgcgctcaccgcaggctcccagggccgctacgccgatgcggcgaaactctttgatcaa
agcgcgcgcgggttggacgcaaagcgccggtcaatcgccgcttacggcggatattttgcc
cgagcactcgccaatcccgatcgggtggaaaacccgccacgccaagcggtcggagcctat
ggcgcattcgcaaaggcgtttactgaaggctttcgcaccgatgttcgcgccgcggttgag
acgcttaggaaggcggaactgcaatatcccgacgacccgaccctcccagccgtgcgagca
caattcgccatgttgatcgacgatcgcgacgaagtgcgcgatggtatcgaaaaggcgctg
aagatcgatgcggatgatccctacgcgcttgaggcccgcgcgaagtatcgcttcaacatc
gagaatgatcgagacggtgccctcgccgacctagagcgtggcctgaaagcggcgccaggg
gacccatcaatctggaactggcttggtgccgtacaggacgaacgcggtgacacgcgtgct
gctgaatacgccgtcaagaaggcaattgagctggacccccaagatcccagctatcacgcc
aaccttgccctgatgtacctgggcgagttgaggcttgccgaggcaaagcgcgagatagat
gcggcgctcgccatcgacccttctttcgatctcgtgctcatcgcacgcggccgctatcac
ctgcagaatggagacgtcgagaaggcaattcaagacctgcttgccggctcgacggccaac
cctgcctattccaatgctcagctgctgcttgccgcagcgcactacgagaaaggcgaccgg
atacctgcggaccaagcgctcgacaatgccgacagactcgacccaaacgatcctatcgtc
tcccaggtacgcacgatcgtttcgatcgatgactatgatgccgatgccgccatccgctac
gcccaagaaacgatgcggcgaacccgcgcaaagggtggcgacacagcagcgattggtgca
aaccagcaagcgggctcggcccttaacaacgccttccgtttgcaaggcctggatgcttgg
gggcaatattacggcgacgcagtattcgaccccttctcgagcgccagctatctggaccag
gcaatccgcggcagcgtcaatcccttgttcaacggatatagcttcagcgttagcccaatt
accaatgcgcaaaacccatcgaccttcgcggcgctcttccaagggcttcttctcgacccg
catttgctggcttaccgggcacgtgcgaccgatctttatcgaacgcccttcttcgagatc
gatctcgggggcggccccaccttagaggacggtaacacgggctggattggcgaagccgag
atccgggggttcgcgtactcccccttcccggtcagcgtcttcggcaatttccaatgggaa
gagccgcgcgatacgatagacctcggaggcgggctcgagatggatcgcgaaacacggttg
atcggcggcaccggctatgtgacggctactccgacccccgacgacagagtggtcgccttc
ttgaacatggcagaggtggacgacagccgcaatatcttcgacattccccatccgatgctc
gtcccgttcaacggcgacagcctaaatggcaataatggatcaaatctcaactctggcgtc
gcttggagccacacattcggctaccagaacattgccaatgccgccttcttcttcaacgac
acggaaaccgtcgagacttcgcggttgcttttctccgacatcccctttccggatattgaa
tatctccggagggagcagagacagacgacttacatcggagctctgaaccacctttacgga
gacggtgatctgacctggcgctacggcttggaggccggcgccgtaactcaaaaggagaaa
accgagtattgcaaccttctccctccggcgataccattgagctccgcgacttcatccgcc
acggcgggagtgatgaaggcctatgtcgatgggctctatgaggtcaccccggacctcaaa
gtcgagggcgccctctttgcccgctacatagagcacgtcaatgacaacaacgtccggctg
gaaccgaagctcggcatcgcctgggcacccgccgagggtcactggctgagggcggccgta
cagcgcgagggctataacctcgatgtcgccacgctcgcgccagtcggcatagtaggcctt
caaccgaaccagtttctcatcggcgctgggggttatgccgatacgttcgcgttccggtgg
gatgccgaatggaatgaccggctctttaccgctctcgactatcagcaccaggaaatccgc
gacggttccatcgacttccccctctcgacgaacgattacgacttccgtaaggcaagggtc
gatcgcgttgctctgactgccaacctggcgctcagccatgggttcggactctctgctact
gccgcccacacgcggagcaaggacttttcgccggctaatcccgctggtgaactgccatta
ctcccggaaaacgccggtcaggtagcactgacctgggtcaacgaggcaaacattcggacg
atgattgccgccaattacgtggggaccaggtcgcaaggttcgacgaggttggacgacttc
tggaccctcgacgcatcactcttatgggagcctttcgacaagcggttcgaggtcgaactc
gccgggttcaacctgcttgacgaggaattcgagctgcgcgacggtcttcccggctggggc
cccaccgtcaagggcaccgtcaaagtgcggttctga
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