Sinorhizobium fredii USDA 257: USDA257_c15890
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Entry
USDA257_c15890 CDS
T02188
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00362
Benzoate degradation
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
USDA257_c15890 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
USDA257_c15890 (pcaH)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
USDA257_c15890 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
DUF4198
Motif
Other DBs
NCBI-ProteinID:
AFL50179
UniProt:
I3X2S3
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Position
complement(1688351..1689100)
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AA seq
249 aa
AA seq
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MSDTENRRPEMGAFFQRDRNWHPPAFAPGYKTSVLRSPQKALLSLDSTISEITGPVFGHS
VLGELDNDLIHNFAKAGESAIGERIIVHGRVLDERGRPVAGALLEFWQANAGGRYRHKKE
SYLAPLDPNFGGCGRTITDENGYYCFRTIRPGAYPWPNGVNDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDRGAIEQLIAPLDWANTMPMDARAYKFDIVLRGRRST
LFENRPEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacagaaaatcgccggcccgagatgggcgcctttttccagcgggaccggaac
tggcatccgccggccttcgcgcccggctacaagacgtcggtgctgcgttcgccgcagaag
gcgctgctttcgctcgacagcacgatttctgaaatcaccggcccggtcttcggccattcg
gtgcttggcgaactcgacaacgacttgatccacaatttcgccaaggccggcgaaagcgcg
atcggcgaacgcatcatcgtgcacggccgggtgctcgacgagcgcggccggccggttgcc
ggcgcgttgctcgaattctggcaggcgaatgccggtgggcgctaccgtcacaagaaggaa
agctatctggcgccgctcgatccgaatttcggcggctgtggccggacgatcaccgacgag
aacggctactactgtttccgaaccatcaggccgggcgcctatccctggccgaacggcgtc
aacgactggcggccggcccatatccatttctcgatcttcggtcacggcttcgcccagcgg
ttgattacccagatgtatttcgaaggggacccgatgatctggaagtgcccgatcgtcggc
acgatccccgaccgcggggcgatcgagcaattgatcgcgccgctcgattgggccaacacc
atgccgatggatgcgcgcgcctataagttcgacatcgtgctgcgcggccgccgctcgacg
ttgttcgagaaccggccggaaggcaattga
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integrated database retrieval system
