Sinorhizobium fredii USDA 257: USDA257_c16590
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Entry
USDA257_c16590 CDS
T02188
Name
(GenBank) putative DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
USDA257_c16590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c16590
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
USDA257_c16590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AFL50248
UniProt:
I3X2Z2
LinkDB
All DBs
Position
complement(1759814..1760680)
Genome browser
AA seq
288 aa
AA seq
DB search
MAPRANWKGYLKVAEVSCPVALYTAASTSERIAFHTINRATGHRVHRQFVDSETGKPVEK
EDQVKGYEVGSEDYVVLEPEEVAAAVPESDKTLSISAFIACGDIDDVYFDKPYYLAPTKS
HAEDAFALIREGMRKKKVAAIARTVLFRRVRTLLIRAYEDGLIATTLNFDYEVRSAEEAF
DGVPDLKIEGEMLELAEHIVKTKRGKFDPAKFDDRYETALAELVKAKLEGNKIEPRKEPK
REKVVDLMEALRQSAGVHAKKAKATTQAKKKPTRGAKTKEASPRRKAS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtggcgccgagagcaaattggaaggggtacctgaaagtcgctgaggtgagctgccctgta
gcgctttacacggcagcgtcgacctcggaacggattgcctttcacaccatcaaccgtgcc
accgggcatcgtgttcaccggcaattcgtcgatagcgagacgggaaagccggtcgaaaag
gaggatcaggtcaagggatacgaggtcggatccgaggattacgtcgtgctggagcccgag
gaggttgcggcggcggttcccgaaagcgacaagacgctgtcgatctcggccttcatcgcc
tgcggcgatatcgacgacgtctatttcgacaagccctactatcttgctccgacgaagagc
cacgccgaagacgcattcgctctgatccgcgagggcatgcgaaagaagaaagtcgctgcc
atcgcgcgaacagtgttgtttcggcgcgtccgcacacttctgatccgcgcctacgaggac
ggtctgatcgcgacgaccttgaatttcgactacgaggttcgctcggccgaagaagcattc
gacggggtgccggatctgaagatcgagggcgagatgctggagcttgctgagcacatcgtc
aagacgaagcgaggaaagttcgatccagcaaaattcgacgatcgctatgagaccgcactt
gccgaactggtcaaagccaaactcgaaggcaacaagatcgagccgcgcaaggagccgaag
cgtgaaaaagtcgtcgacctgatggaggcgttgcgccagagcgccggcgttcacgccaaa
aaggccaaggcgacgacccaggccaaaaagaaacccacccgcggggcgaagacaaaggaa
gcgtccccgcgtcgcaaggcgagctga
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