Sinorhizobium fredii USDA 257: USDA257_c20520
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Entry
USDA257_c20520 CDS
T02188
Symbol
lrp5
Name
(GenBank) AsnC family regulatory protein Lrp
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c20520 (lrp5)
03036 Chromosome and associated proteins [BR:
sfd03036
]
USDA257_c20520 (lrp5)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
USDA257_c20520 (lrp5)
Chromosome and associated proteins [BR:
sfd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
USDA257_c20520 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
MarR
HTH_20
HTH_Crp_2
HTH_5
TrmB
HTH_IclR
Fe_dep_repress
NirdL-like_HTH
GntR
FluMu_N
HVO_0513_N
DUF7343
DprA_WH
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AFL50635
UniProt:
I3X429
LinkDB
All DBs
Position
complement(2154468..2155049)
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AA seq
193 aa
AA seq
DB search
MIPIGMNCSFFSNHARQDRRFPWMDVAGSDSFHVMSKANGRNDLQFGKSSLDETDARILT
ALDADSRLSMRELASVVGMSAPSVSERVRRLEGAGIIRGFTLDVDTRAIGYQIRAMVRIR
PLPGKLHLVEKLIQDRPEFIECDKITGDDPFLARLVVRSIEQMDDVLEALSEHAVTSTAV
IKGTSVKKRLPPL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgataccgattggcatgaattgctcctttttcagcaatcatgcgaggcaagatcgtcga
tttccatggatggatgtggccggatcggatagttttcatgtcatgtcgaaagcaaatggc
cgcaatgaccttcaattcggaaaatcgtccttggacgagaccgatgcgcgaatactgacg
gcgctggatgccgattcgcggctgtctatgcgcgagctcgccagcgtcgtcggcatgtcg
gcgccgagcgtctcggagcgggtgcgccggcttgagggtgccggcatcattcgcggcttc
acgctcgacgtcgatacgcgcgcgatcggctaccagatacgtgccatggtgcggatcaga
ccgcttcccggcaagttgcacctcgtcgagaaactgattcaggatcgccccgaatttatc
gagtgcgacaagatcactggcgacgatccgtttctggcacgcctcgtcgttcggtcgatc
gagcagatggacgacgtgctcgaagccctttccgagcatgcggtcaccagcaccgccgtt
attaaggggacgtcagtcaagaagcggcttccacctctgtag
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