Sinorhizobium fredii USDA 257: USDA257_c21000
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Entry
USDA257_c21000 CDS
T02188
Symbol
gntR2
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c21000 (gntR2)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
USDA257_c21000 (gntR2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
HTH_31
Sigma70_r4
DUF7317
HTH_10
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
AFL50682
UniProt:
I3X476
LinkDB
All DBs
Position
2192092..2193129
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AA seq
345 aa
AA seq
DB search
MEKEDAVSLRGKVITLHEVAVRAGVSRMTVSKVLRGAGNISAETRRRVKQAAEELGYLPN
NLAGSLSSRKSRMVAVIIPSISDVVFSEVLSGINAMLRPQGFQTFIGESLFEPETETELI
RAMLSFRPAGILLNGGMARSADAEKLLQQRNCPAIQLWDCDRRALDFSAGPSHEAAGRLV
AKHFLERGLRRIGYVGAELDKDLCARRRHSALQSSLAAAGIDLVSVTCEDRPRQAVTGRF
LTEQLMRTHPEIEAIHFLNDAMALGGLSYMHEAGLPVPERVSVVGFNGTSLANAVRTRLT
TIDLPRTEIGEKAARALLQMIGEEPVPDAWQAPLELVQGNTTVAV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaggacgcggtgagtttgcgcggaaaggtgattaccctgcacgaggtggcc
gtccgggccggcgtcagccggatgaccgtctcgaaagtcctgcgcggcgcgggcaacatt
tcagcggaaacgcgccggagggtgaaacaagccgccgaggagctcggctatctgccgaac
aatcttgccgggtcgctgagttcgcgcaagagccggatggtggcggtgatcatcccatcg
atcagcgacgtcgtgttttcggaggtgctgagcggcatcaatgcaatgcttcggccgcag
gggtttcagaccttcatcggcgaatcgctgtttgaaccggagaccgaaaccgagctcatc
cgcgccatgctgtcgttccggccggcaggcattcttctgaacggcggtatggcgcgaagc
gccgatgcggaaaagttgttgcagcagcgaaactgcccggccatccagctctgggattgc
gacaggcgggcgctcgatttcagcgccggtccatcgcacgaggcggccggacgcctggtc
gcaaagcatttcctcgagcgcgggctgcggcgcattggctatgtgggcgccgaactcgac
aaggatctctgcgctcgccgccgtcattcggcgctgcagtcgtcgcttgccgccgcaggt
atcgatcttgtcagcgtgacttgcgaggacaggccacggcaggcggtcacgggacgcttt
ctgacggagcagctgatgcggacgcatcccgagatcgaggccatccactttctcaacgac
gccatggcgctcggcggtctgtcttacatgcacgaagccgggctcccagtgcccgagcgg
gtctccgtggtcggcttcaacggcacatcgctggcaaacgcggtcagaacgcggctcacc
acgatcgacctgccgcgaaccgagatcggcgagaaggccgcccgggcgctgttgcagatg
attggggaggagccggtgccggacgcctggcaagcgccgctcgagctggtgcagggcaat
acgaccgtggccgtatag
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