Sinorhizobium fredii USDA 257: USDA257_c21420
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Entry
USDA257_c21420 CDS
T02188
Symbol
luxQ1
Name
(GenBank) autoinducer 2 sensor kinase/phosphatase LuxQ
Organism
sfd
Sinorhizobium fredii USDA 257
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Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
Response_reg
HisKA
PAS_8
HATPase_c_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AFL50724
UniProt:
I3X4B8
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Position
complement(2237573..2241130)
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AA seq
1185 aa
AA seq
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MPGWVVLSVSTAYVVILFLIAWWTDRRGAGRRLAVPTEWMAALGYALTLAIYNTSWSFYG
SVGRALSGFDFLSIYVGPTLVLIFGQRLIARIVTVAKSQNITSIADFIAARYGKSQALAA
LVTMAALLAVLPYIALQLKAVGTSFDILTAPAVAPEGVRPIRGDSTFAVAASMALFAIMF
GVRHIHASEHHRGLMAAIAFESLVKLSAFVIVALFIVFRMFDGLGDLVARAEADPRMGSL
LAPDFFDPTWISNTIIAAISFLCLPHMFHVAVVENKSLSQVRAAAWLYPAYLIVFSVLMV
PIAIAGIARFADTVNPDTFVISLPLAADAPLMALIAFLGGFSAATGMVIVASVALSTMLC
NDVIVPLLLRSRLVGRGGAIWPSPSALLLVRRISVAAILLLAYMMNRLVDQAYPLTVIGL
LSFVAIAQFGPAFLGGLLWRRAKSAGAGAGIVVGFAFWIYTLLLPSIAPLVPAVDAVVAN
GPLGLAWLRPQSLFGIVGLDPISHATLWSLGANLAVFAAVSLLADRSPLERLQAEAFAEG
VPAPPPLASLPLVTRLDDLKTLAARFVGAERSVSAFDDFVEQRRARQDGLADVDAMRFTE
NLIAGALGAASARVVMAAALESRSLSRKAAVGMLDEASQALHFNRKLLQGALESVPQGIC
VFDADLAIEAWNARFLTLLDLPKDLIRVGLPLADLVDFNRERGEYDGEDLKALLVNRDLA
RQSWPYVYERKRPDGMVLEIAYDRMAESGYISTYTDVTERHRAAAGLRRANEELERRVQE
RTQALEQAKAEAERANIGKTRFLAAASHDLLQPLNAARLYLAALDESLRLKPDEAEKDLR
TEERALAKNAAAALSSTERLLDELLDISSYDSGAVRAQPVDFSVGSLLAQLELEFSALAR
QRGLTLKVVASTRFVRTDPQLLRRVLQNLLSNAIRYTPRGRVLLGCRRRKDGLRIEVRDT
GIGIAPERQKEIFEEFRRLDTGEEREKGSGLGLAIVERICRLLDLPLKVRSRPGQGTCFI
VTVPLAAQGAAVAVSEKTATPSIANHAALTVLCVDNDAAIREGLSALLSRWGHRPIVASD
ERTALANCNGLVPDLALVDYHLDGTTGVEVLDGLRKHWGREVRGLVITADRSEEVSAKAK
ALGCEVMAKPVKPAALRRYLDAVALLKGAGLQGEEEHEHAHRHRG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttgggtcgtcctctccgtttctacagcctatgtcgtcatcctgttcctgatc
gcctggtggacggatcggcgaggtgcgggccggcgcttggccgtacccaccgagtggatg
gcggcactcggctacgcgctgacgcttgccatctacaacacgtcctggagcttctacggt
tcggtcgggcgcgccctgagcggtttcgacttcctgtcgatctatgtcggcccgactctc
gtgctgatcttcgggcagcggctgatcgccaggatcgtcacggtcgcgaagagccagaac
atcacctcgatcgccgacttcatcgcggcgcgatacggcaagagccaggcactcgccgcg
ctcgtcaccatggcggctctgctcgccgtgctgccctatatagcactgcagctgaaggcg
gtcggcaccagtttcgacatcctgaccgcgccggccgtcgcccccgaaggcgtccggccg
atccgcggcgacagcacgtttgccgtagccgcctcgatggcgctcttcgccatcatgttc
ggcgttcggcacatccatgcgagcgagcaccatcggggcctgatggcggcgatcgccttc
gaaagcctggtcaagctttcggccttcgttatcgtggcgctgttcattgtcttccgcatg
ttcgacggtctcggcgacctcgtcgcccgcgccgaggcggatccgcgcatggggtccttg
ctggcgccggactttttcgatccgacttggatatcgaacaccatcattgccgcgatctcc
ttcctctgcctgccgcacatgtttcatgtcgccgtggtggagaacaaatcgctgtcgcag
gtgcgcgccgccgcctggctctaccccgcctatctcatcgtcttcagcgtcctgatggtg
ccgatcgccatagccggcatcgcccgtttcgccgacacggtaaacccggacaccttcgtg
atctcgctgccgcttgccgccgatgcccccctgatggcgctgatcgcctttctcggcggc
ttctcggcggcaaccggcatggtgatcgtcgcctcggtggcactgagcacgatgctctgc
aacgacgtcatcgtccccctgctgttgcgctcgcgcctcgttggccgcggcggtgcaatc
tggccgtcgccttcggccctgcttttggtgcggcggatctccgtcgcggccatcctgctg
ctcgcctacatgatgaaccgcctggtcgatcaggcctatccgctgaccgttatcggcctg
ctgtccttcgttgcgatcgcccagttcggccccgcttttctcggaggattgctttggcgg
cgcgccaagagcgccggggcgggcgcaggcattgtcgtcggcttcgccttctggatctac
accctgctcctcccctcgattgcgccgctcgtgcccgccgtcgacgccgtggtcgccaac
gggccactcgggctcgcctggctcaggccgcaatcgctcttcggcatcgtcggcctcgat
ccgatttcgcatgcgacgctctggagcctgggtgccaatctcgccgtctttgcggccgtg
tccttgctggcggatcgttcgccgctcgagcgtctccaggcggaggcctttgccgagggg
gtcccggcgccgccgccgctcgcctcattgccgctcgtcacgcggcttgacgacctgaag
acgctcgccgctcgcttcgtcggagccgagcgcagcgtttccgccttcgatgacttcgtg
gaacagcgccgcgcgcgacaggacggacttgccgatgtggatgcgatgcggttcaccgag
aacctcatcgccggcgcgctcggtgcggcctcggcccgcgtggtgatggccgcggcgctc
gaaagccgttcgctgtcgcgcaaggcagccgtggggatgctggacgaggcgtcgcaggcg
ctgcatttcaaccggaagctcttgcaaggggcgcttgaaagcgtgccgcagggcatttgc
gtcttcgacgcagacctcgccattgaggcgtggaacgcccggttccttacgctgctcgac
ctgccgaaggacctgatccgcgtcggcctgccgctcgccgacctcgtcgacttcaaccgc
gagcgcggcgaatacgacggcgaggacctcaaggccctgctcgtcaaccgggatctcgcc
agacaatcctggccctatgtctacgagcgcaagcggccggacggcatggtgctggagatc
gcctacgaccgtatggccgagagcggctatatctcgacctacacggatgtgaccgagcgg
catcgggcagcggccggcctgcgccgcgccaacgaggagctggagcggcgtgtccaggag
cggacgcaggcgctcgagcaggccaaggccgaggcagagcgcgccaatatcggcaagacg
cgctttctcgccgcggcaagccacgatctgctccagccgctgaacgcggcgcggctctat
ctggcggcgctcgacgagagcctgcgcctcaagcccgacgaagccgaaaaggacctgcgg
acagaggagcgggcgcttgcgaagaacgccgcggcggcactttcatcgaccgagcggctg
ctcgacgagctgctggacatctcgtcctatgattccggtgcggtgcgggcgcagcccgtc
gatttttcggtcggctcgcttctcgcccaactcgagctcgagttctccgcccttgcgcgt
cagcgcggcctgacgctcaaggtggttgcctcgacgcgtttcgtccgcaccgacccgcag
ctcctgcgtcgtgtgctgcagaatcttctctcgaacgccatacgctacacgcctagggga
agggttctgctggggtgccggcggcggaaggacggcttgcgcatcgaggtccgtgatacc
ggcatcggcattgccccggagcgccagaaggagattttcgaggagttccgccggctcgat
acgggcgaggagcgggaaaaggggagcggcctcggcctagcgatcgtcgagcgcatctgc
cgcttgctcgatcttcccttaaaagtgcgctcccggccaggccagggaacctgcttcatc
gtcaccgttccgctcgcggcgcaaggtgcggcggtcgccgtttcggaaaagaccgccacg
ccgtcgatcgcgaaccatgccgcgcttaccgtgctctgcgtcgacaatgacgcggcgata
cgggagggcctgtcggccttgctctcccgctggggacaccggccgattgttgcgagcgac
gagaggacggcgcttgccaattgcaacggcctggtgccagatctggcgctcgtggattac
catctcgacggcacgaccggcgtcgaagtgctggacgggctgcgcaagcactggggccgg
gaggtcaggggcctggtgatcaccgcggaccgcagcgaggaggtcagcgcaaaggcgaaa
gcgcttggctgcgaagtcatggcgaagccggtgaagccggccgccttgagacgatatctg
gatgccgtcgccctgctcaagggcgccgggctgcagggggaggaagaacatgagcacgcg
catcgtcatcgcggatga
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