Sinorhizobium fredii USDA 257: USDA257_c22940
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Entry
USDA257_c22940 CDS
T02188
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00730
Thiamine metabolism
sfd01100
Metabolic pathways
sfd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
USDA257_c22940 (thiC)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
USDA257_c22940 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AFL50874
UniProt:
I3X4R8
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All DBs
Position
complement(2403825..2405657)
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AA seq
610 aa
AA seq
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MNVFKPHPATPAVTQGPLPASRKVYKAGEIHADIRVPMREIALHPTSGEPPVTVYDASGP
YTLEDADIRIDQGLPPLRRDWILARGDVESYDGRAIKAEDNGFATGERLTPEFPLRHQPL
RARPGQAVTQLAYARAGIITPEMEFIAIRENLGRKAAKETLQRDGESFGAAVPDFVTAEF
VRQEVASGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWATRW
GADTVMDLSTGRNIHNIRDWIIRNSPVPIGTVPLYQALEKVNGIAEDLTWEVFRDTLIEQ
AEQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHRESFLYEHFDEICDI
CRAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWAKDCQVMIEGPGHVPMHK
IKENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHL
GLPDRNDVKVGVITYKIAAHAADLAKGHPAARIRDDALSRARFEFRWEDQFNLSLDPETA
RNFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKDGLEAMAAKYRDGGDLYMP
LDGAGQPAGE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttcaagcctcaccccgcgacaccggcggtcacgcaggggccgcttccggcg
tcccgcaaggtctacaaggcgggagagatccatgccgatatccgcgtgcctatgcgcgag
atcgcgctgcatccgacatccggcgagccgccggtcaccgtctatgatgcctccgggccc
tacacgctggaggacgccgacatccgcatcgatcaaggcctgccaccccttcgccgcgac
tggatccttgctcgcggcgatgtcgaaagctacgacggacgcgccatcaaggcggaggac
aacggttttgccaccggcgagcggctgacgccggaattccccctgcgccaccagccgctg
agagccaggccggggcaagcggtcacccagcttgcctatgcccgggccggcatcatcacg
ccggagatggaattcatcgccatccgcgagaacctcggccgcaaggcggcgaaagagacg
cttcagcgcgacggcgagagcttcggcgcggcggtgcccgatttcgtcactgcggaattc
gtccgccaggaagtggcgagcgggcgggcgatcattccggccaatatcaaccatccggaa
tccgagccgatgatcatcggccggaacttcctggtgaagatcaatgccaatatcggcaat
tccgccgtcacctcgtcgatggccgaggaagtcgagaagatggtctgggcgacgcgctgg
ggtgctgacacggtcatggacctttcgaccggccgcaacatccacaatatccgtgattgg
atcatccgcaattcgccggtgccgatcggcacggtgccgctctaccaggcgctggagaag
gtaaacggcatcgccgaggacctgacctgggaagtcttccgcgacacgctgatcgagcag
gccgaacagggcgtcgactatttcaccatccatgccggcgtgcggctgcattacattccg
ctgaccgtcaaccgcgtcaccggcatcgtctcgcgcggcggctcgatcatggccaagtgg
tgcctgcaccaccatcgcgaaagcttcctctacgagcatttcgacgagatctgcgacatc
tgccgtgcctatgacgtctccttctcgctcggcgacgggctgcgccccggctcgatcgcc
gacgccaacgatgcggcgcagttcgcggagctcgaaacgctcggcgaactgacgcagatc
gcctgggcgaaggactgccaggtgatgatcgagggccccggccacgtgccgatgcacaag
atcaaggagaacatggacaagcagcttgaagtctgcggcgaggcgcccttctacacgcta
gggccgctgacgaccgacatcgcccctggctacgaccacatcacctccggcatcggcgcg
gcgatgatcggctggttcggcaccgccatgctctgctacgtcacgccgaaggagcatctg
ggactgccggaccgcaacgacgtcaaggtgggcgtcatcacctacaagatcgccgcccac
gccgccgatctcgccaagggccatccggccgctcgcatccgcgacgacgccctgtcgcgc
gcccgcttcgagttccgctgggaggaccagttcaacctgtcgctcgatccggaaacggcc
cgcaatttccacgacgagacgcttccgaaggaggcgcacaaggtcgcgcatttctgctcg
atgtgcggcccgaaattctgctcgatgcggatttcccacgacatccgcgccgaggcgcag
aaggatggcctggaagcgatggctgcgaaataccgcgacggcggcgacctctacatgccg
ctcgacggtgccggccaacccgccggagagtag
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