Sinorhizobium fredii USDA 257: USDA257_c23190
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Entry
USDA257_c23190 CDS
T02188
Symbol
ymfC
Name
(GenBank) putative HTH-type transcriptional regulator YmfC
KO
K03710
GntR family transcriptional regulator
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c23190 (ymfC)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
USDA257_c23190 (ymfC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_11
MarR_2
HTH_24
Rrf2
PknG_TPR
PrlF_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AFL50899
UniProt:
I3X4U3
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All DBs
Position
2433822..2434553
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AA seq
243 aa
AA seq
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MDEPLRDTRTLVIQLRDRIADLIREEGLKPGDKLPTEAQLTQRFKISRPALREALKLLEQ
DGVIYVEHGRGRFVSAMSAVQVDRPITVFESVTDMTRHYGYATLNKVLSIAEEMPDAVTA
EQLKLGQGERVIRLERLRLQKDEPILYCVDYIPRSIIPNRLYDIDWSGSLLDLLDRFRHR
PRMSSATVSAVMLPEDVIERHDLRDFGPALLIRETCFSTAGAPVVHAIDYHRGSHFTFSF
ARK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttggacgaaccgcttcgcgatacgcgcactctggttatccagcttcgcgatcgaatcgcc
gacctgatccgcgaggaggggctgaaacccggcgacaaattgccgaccgaggcgcaactg
acgcagcgtttcaagatctcgcgaccggccctgagagaggccctgaaactgctcgaacag
gatggcgtcatctatgtcgagcacgggcgcggccggttcgtttccgccatgtcggccgtc
caggtggacaggccgatcaccgtgttcgagagcgtcaccgacatgacgcgccactacggc
tatgcgaccctcaacaaggtgctttcgatcgcagaggaaatgcccgacgcggtcaccgct
gaacaattgaagctagggcagggcgagcgcgtcatccgtctcgaaaggctgcgcctgcag
aaggacgagccgatcctctattgcgtcgattacattccgcgcagcatcattccgaaccgc
ctctacgacatcgactggagcggctcgctgctcgatctgcttgatcgcttccggcaccgg
ccgcgcatgtcttcggccaccgtttcggccgtcatgctgccggaggacgtgatcgaacgc
cacgatctcagagacttcggaccggcgctgctcattcgcgaaacctgtttcagcacggcc
ggcgcccccgtcgtccacgccatcgactatcatcgcggcagccacttcaccttcagcttc
gcacggaagtag
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