Sinorhizobium fredii USDA 257: USDA257_c24050
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Entry
USDA257_c24050 CDS
T02188
Name
(GenBank) uncharacterized protein y4yA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00300
Lysine biosynthesis
sfd00470
D-Amino acid metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01120
Microbial metabolism in diverse environments
sfd01230
Biosynthesis of amino acids
Module
sfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
USDA257_c24050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
USDA257_c24050
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
USDA257_c24050
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AFL50981
UniProt:
I3X525
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Position
complement(2521657..2523030)
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AA seq
457 aa
AA seq
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MTLHCQKIGHGLPPILRSATADLLTIHGPLLFDWAARHGSPLNLVWPDALQENLAALKGV
LTECRVEHAIYYGAKVNKSPGLMQAALSAGAGLDVSSLYELRDARLLGAEGVRLVATGPA
KTGAFHQELIDCNALISVDSPEELEDLIHGLPADVGPQPILLRLRPRNQSKSRFGMPADA
VVHCLARLAGESRLRFDGLHFHLSGYLWETRVAALSEAADLIAEARRMGFSPRMIDIGGG
LPIQYVDRARYEAHLAAQAPEDYRNGKIPDSFYPYGSTLSAADWLHRLLEAEMSQGRSVA
GYLAREGLTLAMEPGRALADQAAITVFLISRVKALGPDSHVIFVEGSSFSACETWFASEF
LVDPILVPATRPAAQSPPIRAYLAGHSCLDEDVLSNRWLSFPIAPHAGDLLVYANTGGYQ
MDLLENEFHRHAMPARLCVVKDAEGHPILVPDTIGEV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcattgccagaagatcggccatgggctgccaccgattttgcgatcggcgact
gcggaccttctcaccatacacggtcctcttcttttcgattgggccgcccgccacggctcg
cccctcaatctggtttggccggacgcgctgcaggagaatctcgccgccttgaaaggtgtg
ctaactgagtgccgcgtcgagcatgcgatttattacggggcgaaggtcaacaaatcgccc
gggctgatgcaggcagcgctcagcgcaggcgccgggctcgacgtctccagtctttacgaa
cttcgcgacgcaaggctgctaggggccgagggtgtcaggctcgtggcgacagggccggcg
aagacgggcgcatttcatcaagagctgatcgattgcaacgcgctgatatcggtggactcg
ccggaagagctggaggatctcatccacggtctgccggcagatgttggtccacagccgatc
ctcttgcgtttgcggccgaggaaccagagcaagagccgcttcgggatgccggccgacgcg
gtcgttcattgcctcgctcggctcgccggtgaaagcaggttgcgtttcgacgggctgcat
ttccacctcagcggctatctctgggagacccgtgtcgcagcgctcagcgaggccgccgac
ctcattgccgaagcccggcggatgggattttctccgcgcatgatcgatattggcggtggc
ctgcctatccaatatgtcgaccgagccaggtacgaagcgcatctcgcggcgcaggcgccc
gaggactaccgcaacgggaaaataccggactctttctatccctatggcagcactctttcg
gcagccgactggctgcaccggctcttggaggcggagatgagccagggccgaagcgtagcc
ggctacctggcgcgtgagggtctcacgctggcgatggagccgggccgcgctctggccgac
caggcggcgatcaccgtcttcctgatctcgcgggtgaaggcactcggtccggattcgcac
gtcatctttgtcgagggcagcagtttcagcgcctgcgaaacctggttcgcttccgaattc
ctggtcgatccgattctcgtgccggccacgaggccggccgctcaatcgccgccgatccgc
gcctatctggccggtcacagctgcctggatgaggacgttctcagcaacagatggctgagc
ttcccgatcgcgccgcatgccggtgaccttctggtctacgccaacaccggcggctatcag
atggatctcctcgaaaacgaattccatcgccacgccatgcccgcccgcctctgcgtcgtg
aaggacgcggaagggcatcccattctcgttcccgacacaattggagaggtttag
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