KEGG   Sinorhizobium fredii USDA 257: USDA257_c24050
Entry
USDA257_c24050    CDS       T02188                                 
Name
(GenBank) uncharacterized protein y4yA
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd00300  Lysine biosynthesis
sfd00470  D-Amino acid metabolism
sfd01100  Metabolic pathways
sfd01110  Biosynthesis of secondary metabolites
sfd01120  Microbial metabolism in diverse environments
sfd01230  Biosynthesis of amino acids
Module
sfd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    USDA257_c24050
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    USDA257_c24050
Enzymes [BR:sfd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     USDA257_c24050
SSDB
Motif
Pfam: Orn_Arg_deC_N Ala_racemase_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AFL50981
UniProt: I3X525
LinkDB
Position
complement(2521657..2523030)
AA seq 457 aa
MTLHCQKIGHGLPPILRSATADLLTIHGPLLFDWAARHGSPLNLVWPDALQENLAALKGV
LTECRVEHAIYYGAKVNKSPGLMQAALSAGAGLDVSSLYELRDARLLGAEGVRLVATGPA
KTGAFHQELIDCNALISVDSPEELEDLIHGLPADVGPQPILLRLRPRNQSKSRFGMPADA
VVHCLARLAGESRLRFDGLHFHLSGYLWETRVAALSEAADLIAEARRMGFSPRMIDIGGG
LPIQYVDRARYEAHLAAQAPEDYRNGKIPDSFYPYGSTLSAADWLHRLLEAEMSQGRSVA
GYLAREGLTLAMEPGRALADQAAITVFLISRVKALGPDSHVIFVEGSSFSACETWFASEF
LVDPILVPATRPAAQSPPIRAYLAGHSCLDEDVLSNRWLSFPIAPHAGDLLVYANTGGYQ
MDLLENEFHRHAMPARLCVVKDAEGHPILVPDTIGEV
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgacgctgcattgccagaagatcggccatgggctgccaccgattttgcgatcggcgact
gcggaccttctcaccatacacggtcctcttcttttcgattgggccgcccgccacggctcg
cccctcaatctggtttggccggacgcgctgcaggagaatctcgccgccttgaaaggtgtg
ctaactgagtgccgcgtcgagcatgcgatttattacggggcgaaggtcaacaaatcgccc
gggctgatgcaggcagcgctcagcgcaggcgccgggctcgacgtctccagtctttacgaa
cttcgcgacgcaaggctgctaggggccgagggtgtcaggctcgtggcgacagggccggcg
aagacgggcgcatttcatcaagagctgatcgattgcaacgcgctgatatcggtggactcg
ccggaagagctggaggatctcatccacggtctgccggcagatgttggtccacagccgatc
ctcttgcgtttgcggccgaggaaccagagcaagagccgcttcgggatgccggccgacgcg
gtcgttcattgcctcgctcggctcgccggtgaaagcaggttgcgtttcgacgggctgcat
ttccacctcagcggctatctctgggagacccgtgtcgcagcgctcagcgaggccgccgac
ctcattgccgaagcccggcggatgggattttctccgcgcatgatcgatattggcggtggc
ctgcctatccaatatgtcgaccgagccaggtacgaagcgcatctcgcggcgcaggcgccc
gaggactaccgcaacgggaaaataccggactctttctatccctatggcagcactctttcg
gcagccgactggctgcaccggctcttggaggcggagatgagccagggccgaagcgtagcc
ggctacctggcgcgtgagggtctcacgctggcgatggagccgggccgcgctctggccgac
caggcggcgatcaccgtcttcctgatctcgcgggtgaaggcactcggtccggattcgcac
gtcatctttgtcgagggcagcagtttcagcgcctgcgaaacctggttcgcttccgaattc
ctggtcgatccgattctcgtgccggccacgaggccggccgctcaatcgccgccgatccgc
gcctatctggccggtcacagctgcctggatgaggacgttctcagcaacagatggctgagc
ttcccgatcgcgccgcatgccggtgaccttctggtctacgccaacaccggcggctatcag
atggatctcctcgaaaacgaattccatcgccacgccatgcccgcccgcctctgcgtcgtg
aaggacgcggaagggcatcccattctcgttcccgacacaattggagaggtttag

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