Sinorhizobium fredii USDA 257: USDA257_c25020
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Entry
USDA257_c25020 CDS
T02188
Symbol
gntR3
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c25020 (gntR3)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
USDA257_c25020 (gntR3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
DUF218
HTH_3
HTH_Crp_2
HTH_24
HTH_23
CoA_binding_2
B12-binding
MarR_2
HTH_AraC
TetR_N
YfaZ
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
AFL51078
UniProt:
I3X5C2
LinkDB
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Position
complement(2625284..2626324)
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AA seq
346 aa
AA seq
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MVTITRMQMHNIRKPPTMADVARRTGVSPMTVSRAFKRDSSVSQETREAVLRAAEELGYV
FDSTASNLRSQRTDFIAVTIPSINNANFADTVRALSDRVSERGLQILLGYTNYDVREEER
LIEQLLRRKPEAIVVTGGKHTPRARKLLSNAVIPVIETWDLPEEPIGHVVGFSNAQAVRE
MVDHFVAVGYRKIAFIGGDADRDTRGADRRQGFIAALKDHGLDAPRLIAAGPPPISMREG
ANAMGQLLERFPDTEAVICVSDLSAFGALTECQRRGIAVPDRIAIGGFGDYEIGAISVPS
LTTINAFASEIGAKTAELILDVLHGKLDRPARLTIRPDLILRQTSR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgataacacggatgcagatgcacaatatccgcaagcccccgacgatggccgat
gtggcacggcgaaccggcgtttcgccgatgacggtttcgcgcgccttcaagcgtgacagt
tcagtcagccaggagacccgcgaggcggtgctgcgcgccgccgaggagctcggctatgtc
ttcgacagcaccgcttccaatctccgctcgcagcgcaccgacttcatcgcggtgacgatc
ccgtcgatcaacaatgccaacttcgccgatacagtgcgggcgctttcggaccgcgtttcg
gaaagaggcctgcagatcctcctcggctacaccaattatgacgtccgggaggaggagcgg
ctgatcgagcagctcctgcggcgcaaacctgaagcgatcgtggtgacgggcggcaagcat
acgccgcgggcgcgaaagctcctttcgaatgccgtcatcccggtcatcgagacctgggac
ttgcccgaggagccgatcggccatgttgtcggattctcgaacgcccaggcggtcagggaa
atggtcgatcacttcgtcgccgtcggctaccggaagatcgccttcatcggcggcgacgcg
gaccgcgacacgcgcggcgccgaccggcgccagggttttattgcggccttgaaggaccac
gggcttgatgcgccgcgcctgatcgccgccggtccgccgccgatttcgatgcgcgagggg
gcgaacgccatggggcagttgctcgagcgctttcccgacacggaggcggtgatctgcgtt
tccgacctttccgccttcggggcgctcaccgaatgccagcggcgcggcatcgccgtgccc
gacaggatcgccatcggcggcttcggcgactacgagatcggagcaatctccgtgcctagc
ctgacgacgatcaacgccttcgccagcgagatcggcgcaaaaacggcggagctgatcctc
gacgtgctccacggcaagctcgaccggccggcgcggctgacgatccgccccgacctgatc
ctgcgccagaccagccgttag
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