Sinorhizobium fredii USDA 257: USDA257_c26300
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Entry
USDA257_c26300 CDS
T02188
Symbol
degU
Name
(GenBank) transcriptional regulatory protein DegU
KO
K07684
two-component system, NarL family, nitrate/nitrite response regulator NarL
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c26300 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfd02022
]
USDA257_c26300 (degU)
Two-component system [BR:
sfd02022
]
NarL family
NarX-NarL (nitrate respiration)
USDA257_c26300 (degU)
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_28
Sigma70_r4
HTH_40
HTH_38
HTH_30
HTH_23
HTH_Tnp_ISL3
CENP-B_N
HTH_7
HTH_29
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AFL51204
UniProt:
I3X5P8
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Position
complement(2757453..2758106)
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AA seq
217 aa
AA seq
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MTTAIRVAVIDDHPLFREGVTRSLSELEGFEIVAEGGSRDDALKIAENLAPDVMLLDISM
PGSGIEAVPLILQIAPSQKIVMLTVSEAGDDVKAALQGGAKGYVLKGIGSRALADVIRTV
ASGESYVAPTLSAKLLSNGAPAAASKFDLIHNLTTREREVLNLVASGMSNKQVARQLNLH
EKTIKHHMTQIMAKLDVANRTEAAMVLRDALDRPLSQ
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcaattcgcgttgcggtgatcgacgatcatcctctgttcagagagggagtg
acgaggagcctatcggagctcgaaggcttcgaaatcgtagcggaaggcggttcgcgcgac
gatgcactgaagatagccgaaaacctcgcccccgacgtgatgctgctcgatatatccatg
ccgggtagcgggatcgaggcggttccgctcattcttcagatcgctccgtcacagaagatc
gtcatgctcaccgtatccgaggctggcgatgacgttaaggcagccttgcagggcggcgcc
aagggctacgtcctcaaggggatcggatcgagagcgctggcggatgtcatccgcactgtg
gcctcaggcgaaagctatgtggctccgacactctcggccaagctcctgtccaacggtgcg
ccggccgctgcaagcaagttcgacttgatccacaacctgaccactagagagcgggaggtt
ctcaatctcgtagcgtcgggaatgagcaacaagcaggtcgctcgccagctcaatcttcac
gagaagacgatcaagcaccacatgacacagatcatggcgaagcttgacgtcgccaaccgc
accgaggctgcgatggtgctccgcgacgcgctcgaccggccgctcagtcaatga
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