KEGG   Sinorhizobium fredii USDA 257: USDA257_c29170
Entry
USDA257_c29170    CDS       T02188                                 
Name
(GenBank) lytic transglycosylase catalytic
  KO
K03194  type IV secretion system protein VirB1
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    USDA257_c29170
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfd02044]
    USDA257_c29170
Secretion system [BR:sfd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   USDA257_c29170
SSDB
Motif
Pfam: SLT DUF2188 Tower
Other DBs
NCBI-ProteinID: AFL51488
UniProt: I3X6I2
LinkDB
Position
3061402..3062073
AA seq 223 aa
MPVAFVDLAQTCAPMVAAETLAGVVSLESRFEPFAIRIKSGPPLSEQPTTKAEAIEIATS
RAAERQDIQLGLGGIGMEELRKMSFSISDAFDPCLNLQATATLLDGYYRLALRAGADPRR
AERDMLRSYYGRDDPSAGAIVEYDEQVRKEIERLGQTLAMLTIGDGGEDRGPSGGTAVDD
AVEAESDATPNDQTASAPAWDVFNSRRRSSVLVFRNNKMEQSE
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcccgttgccttcgtggatctcgcgcagacctgtgcacctatggtcgcggccgaaact
cttgctggcgtcgtcagcctcgaaagtcgtttcgagcccttcgcgatccggatcaagagc
ggaccgccgctctctgaacagcccacgaccaaggcggaggcgatcgaaatcgccacgtca
cgggcggccgaacggcaggacatccagctcggccttggcggcattggcatggaagagctt
cgaaagatgagcttctcgatttctgacgctttcgatccatgccttaacctccaggccacc
gccacactgctcgacggatactaccggctcgcactcagggccggcgccgatccgaggcgc
gccgagcgggacatgctgcgatcctactacgggcgggacgatccgtccgccggcgccatc
gtcgaatatgacgaacaagttcgcaaagaaatcgaaaggctcggccaaaccctcgcaatg
ctgacgatcggcgatggtggggaggacagggggccgagcggggggacggctgtcgatgac
gccgtcgaagccgaaagcgatgctaccccgaacgatcagacggcgtccgcgccggcctgg
gatgtcttcaattcgcggcggcggtcctccgtcctcgtttttcggaacaataaaatggag
cagagtgaatga

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